RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 TFAP2BQ92481 460 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 TRIM11Q96F44 468 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
PKP4-215ENST00000494945 PAAF1Q9BRP4 392 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 TMEM175Q9BSA9 504 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CACNG4Q9UBN1 327 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 DSEQ9UL01 958 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 GUCA1BQ9UMX6 200 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 TFR2Q9UP52 801 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 STXBP5LQ9Y2K9 1186 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 CEP83Q9Y592 693 aa11.73□□□□□ -0.53
PKP4-215ENST00000494945 MTCL1Q9Y4B5 1905 aaKnown RBP11.72□□□□□ -0.53
PKP4-215ENST00000494945 TMCO5BA8MYB1 307 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 GABRDO14764 452 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 CYP11A1P05108 521 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 NSFP46459 744 aaKnown RBP11.72□□□□□ -0.53
PKP4-215ENST00000494945 TCEAL1Q15170 157 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 IFI16Q16666 785 aaKnown RBP11.72□□□□□ -0.53
PKP4-215ENST00000494945 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 CD300LGQ6UXG3 332 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 METTL23Q86XA0 190 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 PHF13Q86YI8 300 aaPredicted RBP11.72□□□□□ -0.53
PKP4-215ENST00000494945 CRYBG2Q8N1P7 616 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 TMEM35BQ8NCS4 154 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 SECISBP2LQ93073 1101 aaKnown RBP11.72□□□□□ -0.53
PKP4-215ENST00000494945 CYFIP2Q96F07 1278 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 VCPIP1Q96JH7 1222 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 TNIP3Q96KP6 325 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 SUSD3Q96L08 255 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 HEXIM2Q96MH2 286 aaKnown RBP11.72□□□□□ -0.53
PKP4-215ENST00000494945 ZSWIM1Q9BR11 485 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 LHX5Q9H2C1 402 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 TAS2R14Q9NYV8 317 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 TRIM10Q9UDY6 481 aa11.72□□□□□ -0.53
PKP4-215ENST00000494945 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.72□□□□□ -0.53
PKP4-215ENST00000494945 TBKBP1A7MCY6 615 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 O00370 1275 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 TRAPPC3O43617 180 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 B4GALT3O60512 393 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 CAPN15O75808 1086 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 DGKIO75912 1065 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 KIF4AO95239 1232 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 ABL1P00519 1130 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 MYBL1P10243 752 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 TYMPP19971 482 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 OR1G1P47890 313 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 GNG11P61952 73 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 WDR5P61964 334 aaKnown RBP11.71□□□□□ -0.53
PKP4-215ENST00000494945 GPC5P78333 572 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 ORC1Q13415 861 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 DNTTIP2Q5QJE6 756 aaKnown RBP11.71□□□□□ -0.53
PKP4-215ENST00000494945 NAA35Q5VZE5 725 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 WSCD1Q658N2 575 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 ARHGAP17Q68EM7 881 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 LCLAT1Q6UWP7 414 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 ACOT1Q86TX2 421 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 OSTM1Q86WC4 334 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 RHOT2Q8IXI1 618 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 RFFLQ8WZ73 363 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 TOP1MTQ969P6 601 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 NOX5Q96PH1 765 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 HTATIP2Q9BUP3 242 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 COLEC11Q9BWP8 271 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 NRDE2Q9H7Z3 1164 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 DDX43Q9NXZ2 648 aaKnown RBP11.71□□□□□ -0.53
PKP4-215ENST00000494945 DNAJB4Q9UDY4 337 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 NME7Q9Y5B8 376 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 DUSP10Q9Y6W6 482 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 PLXNA3P51805 1871 aa11.71□□□□□ -0.53
PKP4-215ENST00000494945 MACROD2A1Z1Q3 448 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 CARNS1A5YM72 827 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 MICAL2O94851 1124 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 UPP2O95045 317 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 ALDH2P05091 517 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 CFHP08603 1231 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 SETSIPP0DME0 302 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 ABCB4P21439 1286 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 IGFBP6P24592 240 aaPredicted RBP11.7□□□□□ -0.54
PKP4-215ENST00000494945 PCSK1P29120 753 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 BRCC3P46736 316 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 GATMP50440 423 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 HADHBP55084 474 aaKnown RBP11.7□□□□□ -0.54
PKP4-215ENST00000494945 FPGSQ05932 587 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 C1QBPQ07021 282 aaKnown RBP11.7□□□□□ -0.54
PKP4-215ENST00000494945 ZNF569Q5MCW4 686 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 MON1BQ7L1V2 547 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 PASD1Q8IV76 773 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 C7orf61Q8IZ16 206 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 B3GALNT2Q8NCR0 500 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 MSANTD4Q8NCY6 345 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 TRIM58Q8NG06 486 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 KIF18AQ8NI77 898 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 CPA5Q8WXQ8 436 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 RABGGTAQ92696 567 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 ALS2CR12Q96Q35 445 aa11.7□□□□□ -0.54
PKP4-215ENST00000494945 IRX2Q9BZI1 471 aaPredicted RBP11.7□□□□□ -0.54
PKP4-215ENST00000494945 THAP2Q9H0W7 228 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms