RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 CFAP58Q5T655 872 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 EMC10Q5UCC4 262 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 CNPY4Q8N129 248 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 TMEM35BQ8NCS4 154 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 BEST2Q8NFU1 509 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 WNT8AQ9H1J5 351 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 SMYD3Q9H7B4 428 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 HES2Q9Y543 173 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 CEP83Q9Y592 693 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 TRPV2Q9Y5S1 764 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 MED7O43513 233 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 CILPO75339 1184 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 KRT14P02533 472 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 ASGR1P07306 291 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 GLI1P08151 1106 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 COMTP21964 271 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 MMP8P22894 467 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 GUCY2FP51841 1108 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 CLUL1Q15846 466 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 UBXN11Q5T124 520 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 MAP3K21Q5TCX8 1036 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 CCSAPQ6IQ19 270 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 SH2D3CQ8N5H7 860 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 ZMAT2Q96NC0 199 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 ZSWIM1Q9BR11 485 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 C11orf70Q9BRQ4 267 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 SDCBP2Q9H190 292 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 MRPL47Q9HD33 250 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 SCINQ9Y6U3 715 aa19.64■□□□□ 0.73
TSPAN4-212ENST00000494815 HEXIM1O94992 359 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 HNRNPH1P31943 449 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 RAP1GAPP47736 663 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 CARSP49589 748 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 APLP1P51693 650 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 RAD23BP54727 409 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 TNNC1P63316 161 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 INCA1Q0VD86 236 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 PTP4A2Q12974 167 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 FAM47CQ5HY64 1035 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 FAM228AQ86W67 206 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 LRRC52Q8N7C0 313 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 PCSK9Q8NBP7 692 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 TFAP2BQ92481 460 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 CD101Q93033 1021 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 ANAPC7Q9UJX3 599 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 NFU1Q9UMS0 254 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 UBQLN1Q9UMX0 589 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 NOC2LQ9Y3T9 749 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 TMEM110-MUSTN1A8MSY1 372 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 TRPA1O75762 1119 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 GNRH1P01148 92 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 CDH8P55286 799 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 KCNA10Q16322 511 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 XKR4Q5GH76 650 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 KCTD16Q68DU8 428 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 PLEKHA7Q6IQ23 1121 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 TMEM130Q8N3G9 435 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 CDY2AQ9Y6F7 541 aa19.63■□□□□ 0.73
TSPAN4-212ENST00000494815 CALB1P05937 261 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 MAP2K2P36507 400 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 ATP1A2P50993 1020 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 DCAF12L1Q5VU92 463 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 FBXW10Q5XX13 1052 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 C1orf131Q8NDD1 294 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 WHAMMQ8TF30 809 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 RNPC3Q96LT9 517 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 NAP1L3Q99457 506 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 EPN3Q9H201 632 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 LHX5Q9H2C1 402 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 EPB41L5Q9HCM4 733 aa19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 BARX2Q9UMQ3 279 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-212ENST00000494815 XPOTO43592 962 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 SPOPO43791 374 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 KIAA0754O94854 1291 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 FAM153BP0C7A2 387 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 KCNE1P15382 129 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 CTNNA2P26232 953 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 LSP1P33241 339 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 CTNNA1P35221 906 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 SLC1A1P43005 524 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 FAM153CQ494X1 144 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 SLC4A11Q8NBS3 891 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 CD99L2Q8TCZ2 262 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 ALG3Q92685 438 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 SENP6Q9GZR1 1112 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 PARVAQ9NVD7 372 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 FAM153AQ9UHL3 310 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 CCDC188H7C350 402 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 MYO1FO00160 1098 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 TLR3O15455 904 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 CD4P01730 458 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 CD19P15391 556 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 SSTR3P32745 418 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 RNASE9P60153 205 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 GUCY2DQ02846 1103 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 PTPN11Q06124 597 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 MAMLD1Q13495 774 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 PXYLP1Q8TE99 480 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 PIK3R5Q8WYR1 880 aa19.61■□□□□ 0.73
TSPAN4-212ENST00000494815 TMEM176AQ96HP8 235 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms