RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TAF12Q16514 161 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 L1TD1Q5T7N2 865 aaKnown RBP25.07■■□□□ 1.6
COL27A1-208ENST00000494780 LRRTM3Q86VH5 581 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 DCP1BQ8IZD4 617 aaKnown RBP25.07■■□□□ 1.6
COL27A1-208ENST00000494780 SPEM1Q8N4L4 309 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 DNAJC19Q96DA6 116 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 ACCSQ96QU6 501 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 ZMYM5Q9UJ78 669 aa25.07■■□□□ 1.6
COL27A1-208ENST00000494780 SPECC1L-ADORA2AF8WAN1 911 aa25.06■■□□□ 1.6
COL27A1-208ENST00000494780 SOX9P48436 509 aa25.06■■□□□ 1.6
COL27A1-208ENST00000494780 CYP4F8P98187 520 aa25.06■■□□□ 1.6
COL27A1-208ENST00000494780 GAS6Q14393 721 aa25.06■■□□□ 1.6
COL27A1-208ENST00000494780 DGKKQ5KSL6 1271 aa25.06■■□□□ 1.6
COL27A1-208ENST00000494780 BPIFB1Q8TDL5 484 aa25.06■■□□□ 1.6
COL27A1-208ENST00000494780 OLFML3Q9NRN5 406 aa25.06■■□□□ 1.6
COL27A1-208ENST00000494780 PRAMEF12O95522 483 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 SDHBP21912 280 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 CTHP32929 405 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 SATB1Q01826 763 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 KCNA1Q09470 495 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 RESTQ13127 1097 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 RSPO4Q2I0M5 234 aaPredicted RBP25.05■■□□□ 1.6
COL27A1-208ENST00000494780 CELF5Q8N6W0 485 aaKnown RBP25.05■■□□□ 1.6
COL27A1-208ENST00000494780 GIPC2Q8TF65 315 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 ZFYVE19Q96K21 471 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 CLIC6Q96NY7 704 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 FAM213AQ9BRX8 229 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 ABI2Q9NYB9 513 aaPredicted RBP25.05■■□□□ 1.6
COL27A1-208ENST00000494780 GTSE1Q9NYZ3 720 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 TBC1D7Q9P0N9 293 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 GMEB2Q9UKD1 530 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 RAB23Q9ULC3 237 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 PCDHB13Q9Y5F0 798 aa25.05■■□□□ 1.6
COL27A1-208ENST00000494780 TCHHQ07283 1943 aa25.04■■□□□ 1.6
COL27A1-208ENST00000494780 PAPSS2O95340 614 aaPredicted RBP25.04■■□□□ 1.6
COL27A1-208ENST00000494780 GCNT3O95395 438 aa25.04■■□□□ 1.6
COL27A1-208ENST00000494780 LDHAP00338 332 aaKnown RBP25.04■■□□□ 1.6
COL27A1-208ENST00000494780 CDR1P51861 262 aa25.04■■□□□ 1.6
COL27A1-208ENST00000494780 ALCAMQ13740 583 aa25.04■■□□□ 1.6
COL27A1-208ENST00000494780 TXNDC11Q6PKC3 985 aa25.04■■□□□ 1.6
COL27A1-208ENST00000494780 BRSK2Q8IWQ3 736 aa25.04■■□□□ 1.6
COL27A1-208ENST00000494780 RBM12Q9NTZ6 932 aaKnown RBP25.04■■□□□ 1.6
COL27A1-208ENST00000494780 THG1LQ9NWX6 298 aaKnown RBP25.04■■□□□ 1.6
COL27A1-208ENST00000494780 PCDHB5Q9Y5E4 795 aa25.04■■□□□ 1.6
COL27A1-208ENST00000494780 MORC2Q9Y6X9 1032 aaPredicted RBP25.04■■□□□ 1.6
COL27A1-208ENST00000494780 PRR5-ARHGAP8B1AHC4 643 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 GARTP22102 1010 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 ARHGAP8P85298 464 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 TFAMQ00059 246 aaKnown RBP25.03■■□□□ 1.6
COL27A1-208ENST00000494780 TSPY1Q01534 308 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 LMNB2Q03252 620 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 CCDC73Q6ZRK6 1079 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 TTC8Q8TAM2 541 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 CACTINQ8WUQ7 758 aaKnown RBP25.03■■□□□ 1.6
COL27A1-208ENST00000494780 SLC46A2Q9BY10 475 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 DMXL1Q9Y485 3027 aa25.03■■□□□ 1.6
COL27A1-208ENST00000494780 MED19A0JLT2 244 aaPredicted RBP25.02■■□□□ 1.6
COL27A1-208ENST00000494780 SYT1P21579 422 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 DDX6P26196 483 aaKnown RBP eCLIP25.02■■□□□ 1.6
COL27A1-208ENST00000494780 POLR2BP30876 1174 aaKnown RBP25.02■■□□□ 1.6
COL27A1-208ENST00000494780 WNT7BP56706 349 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 CEBPZQ03701 1054 aaKnown RBP25.02■■□□□ 1.6
COL27A1-208ENST00000494780 NFE2Q16621 373 aaPredicted RBP25.02■■□□□ 1.6
COL27A1-208ENST00000494780 WDR44Q5JSH3 913 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 LAIR1Q6GTX8 287 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 FAM173BQ6P4H8 233 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 SYCP3Q8IZU3 236 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 CMTM8Q8IZV2 173 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 SYNPOQ8N3V7 929 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 SAAL1Q96ER3 474 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 RBAKQ9NYW8 714 aaPredicted RBP25.02■■□□□ 1.6
COL27A1-208ENST00000494780 AGAP1Q9UPQ3 857 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 FRYLO94915 3013 aa25.02■■□□□ 1.6
COL27A1-208ENST00000494780 FRMD3A2A2Y4 597 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 SOBPA7XYQ1 873 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 F11P03951 625 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 ITGB3P05106 788 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 IDEP14735 1019 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 HMGA1P17096 107 aaKnown RBP25.01■■□□□ 1.59
COL27A1-208ENST00000494780 TGM1P22735 817 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 STAT6P42226 847 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 CASP5P51878 434 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 PON2Q15165 354 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 ITPRIPL2Q3MIP1 535 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 TMEM150AQ86TG1 271 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 PDCL2Q8N4E4 241 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 LRRC52Q8N7C0 313 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 C1orf127Q8N9H9 656 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 ZSWIM2Q8NEG5 633 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 LEO1Q8WVC0 666 aaPredicted RBP25.01■■□□□ 1.59
COL27A1-208ENST00000494780 ACBD6Q9BR61 282 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 SMG9Q9H0W8 520 aaKnown RBP25.01■■□□□ 1.59
COL27A1-208ENST00000494780 TMLHEQ9NVH6 421 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 USP18Q9UMW8 372 aa25.01■■□□□ 1.59
COL27A1-208ENST00000494780 EXTL3O43909 919 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 HUS1O60921 280 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 CNR2P34972 360 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 AVPR1AP37288 418 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 NLRP12P59046 1061 aa25■■□□□ 1.59
COL27A1-208ENST00000494780 TNK2Q07912 1038 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms