RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 MUTYHQ9UIF7 546 aa17.08■□□□□ 0.32
LIME1-209ENST00000494776 CTNND2Q9UQB3 1225 aa17.08■□□□□ 0.32
LIME1-209ENST00000494776 YIPF1Q9Y548 306 aa17.08■□□□□ 0.32
LIME1-209ENST00000494776 C5orf42Q9H799 3197 aa17.08■□□□□ 0.32
LIME1-209ENST00000494776 PPP1R3GB7ZBB8 358 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 SLC16A3O15427 465 aaKnown RBP17.07■□□□□ 0.32
LIME1-209ENST00000494776 DCXO43602 365 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 STX10O60499 249 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 STAU1O95793 577 aaKnown RBP17.07■□□□□ 0.32
LIME1-209ENST00000494776 P4HA1P13674 534 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 BMP6P22004 513 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 GCLMP48507 274 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 TUFMP49411 452 aaKnown RBP17.07■□□□□ 0.32
LIME1-209ENST00000494776 ENPEPQ07075 957 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 NFE2Q16621 373 aaPredicted RBP17.07■□□□□ 0.32
LIME1-209ENST00000494776 MGAT5BQ3V5L5 792 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 ZACNQ401N2 412 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 TCERG1LQ5VWI1 586 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 LRRTM3Q86VH5 581 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 OSTM1Q86WC4 334 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 OR6B3Q8NGW1 331 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 SPPL2BQ8TCT7 592 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
LIME1-209ENST00000494776 IMPG2Q9BZV3 1241 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 NUP62CLQ9H1M0 184 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 PCDHB5Q9Y5E4 795 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 C2orf16Q68DN1 1984 aa17.07■□□□□ 0.32
LIME1-209ENST00000494776 TSC2P49815 1807 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 PI4K2BG5E9Z4 385 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 GABRDO14764 452 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 VNN1O95497 513 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 VNN2O95498 520 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 HLA-DRAP01903 254 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 RHOP08100 348 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 PDGFRBP09619 1106 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 WARSP23381 471 aaKnown RBP17.06■□□□□ 0.32
LIME1-209ENST00000494776 GNL1P36915 607 aaPredicted RBP17.06■□□□□ 0.32
LIME1-209ENST00000494776 PAK1Q13153 545 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 DCAF17Q5H9S7 520 aaPredicted RBP17.06■□□□□ 0.32
LIME1-209ENST00000494776 INTS6LQ5JSJ4 861 aaKnown RBP17.06■□□□□ 0.32
LIME1-209ENST00000494776 C1orf220Q5T0J3 134 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 CYP4A22Q5TCH4 519 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 MYADMQ96S97 322 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 MRPL45Q9BRJ2 306 aaKnown RBP17.06■□□□□ 0.32
LIME1-209ENST00000494776 XYLT2Q9H1B5 865 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 CRISPLD1Q9H336 500 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 EPHX3Q9H6B9 360 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 HSFX1Q9UBD0 423 aa17.06■□□□□ 0.32
LIME1-209ENST00000494776 MRPS23Q9Y3D9 190 aaKnown RBP17.06■□□□□ 0.32
LIME1-209ENST00000494776 ZNF197O14709 1029 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 HCRTO43612 131 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 TACC1O75410 805 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 SOAT2O75908 522 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 FAM163BP0C2L3 166 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 GTF2H1P32780 548 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 STX17P56962 302 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 PPP3CAQ08209 521 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 VEPH1Q14D04 833 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 TAF12Q16514 161 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 CCDC40Q4G0X9 1142 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 SCARA5Q6ZMJ2 495 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 PDZD4Q76G19 769 aaPredicted RBP17.05■□□□□ 0.32
LIME1-209ENST00000494776 LIMS2Q7Z4I7 341 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 SPATA2LQ8IUW3 424 aaPredicted RBP17.05■□□□□ 0.32
LIME1-209ENST00000494776 TTC9BQ8N6N2 239 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 KBTBD7Q8WVZ9 684 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 TAF4BQ92750 862 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 CEP63Q96MT8 703 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 SYT15Q9BQS2 421 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 VRTNQ9H8Y1 702 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 TMEM8AQ9HCN3 771 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■■■ 96.1
LIME1-209ENST00000494776 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 CEP72Q9P209 647 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 ARMCX3Q9UH62 379 aaPredicted RBP17.05■□□□□ 0.32
LIME1-209ENST00000494776 GTF3C4Q9UKN8 822 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 CDH9Q9ULB4 789 aa17.05■□□□□ 0.32
LIME1-209ENST00000494776 N4BP1O75113 896 aaKnown RBP17.04■□□□□ 0.32
LIME1-209ENST00000494776 ASGR2P07307 311 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 MYL4P12829 197 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 COL9A1P20849 921 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 LMO2P25791 158 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 PSMC1P62191 440 aaKnown RBP17.04■□□□□ 0.32
LIME1-209ENST00000494776 KRT39Q6A163 491 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 ITIH5Q86UX2 942 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 ZC3H3Q8IXZ2 948 aaKnown RBP17.04■□□□□ 0.32
LIME1-209ENST00000494776 LEMD2Q8NC56 503 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 ITFG1Q8TB96 612 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 ING5Q8WYH8 240 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 ELMO3Q96BJ8 720 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 METTL14Q9HCE5 456 aaKnown RBP17.04■□□□□ 0.32
LIME1-209ENST00000494776 TMLHEQ9NVH6 421 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 CDH7Q9ULB5 785 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 ASB3Q9Y575 518 aa17.04■□□□□ 0.32
LIME1-209ENST00000494776 ZFP37Q9Y6Q3 630 aaPredicted RBP17.04■□□□□ 0.32
LIME1-209ENST00000494776 MYBPHLA2RUH7 354 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms