RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 ASS1P00966 412 aaKnown RBP25.11■■□□□ 1.61
CLIC3-203ENST00000494426 FAM163BP0C2L3 166 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 LMO2P25791 158 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 TNNC1P63316 161 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 MYL7Q01449 175 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 DUSP4Q13115 394 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 KRT39Q6A163 491 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 SPOPLQ6IQ16 392 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 FRMD5Q7Z6J6 570 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 GJD3Q8N144 294 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 TTC9BQ8N6N2 239 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 SLC35C1Q96A29 364 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 RPGRIP1Q96KN7 1286 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 SRRTQ9BXP5 876 aaKnown RBP25.11■■□□□ 1.61
CLIC3-203ENST00000494426 SLC27A5Q9Y2P5 690 aa25.11■■□□□ 1.61
CLIC3-203ENST00000494426 CUL9Q8IWT3 2517 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 PIK3CAP42336 1068 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 NTHL1P78549 312 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 CCDC142Q17RM4 750 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 ZNF667Q5HYK9 610 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 INTS6LQ5JSJ4 861 aaKnown RBP25.1■■□□□ 1.61
CLIC3-203ENST00000494426 GRASPQ7Z6J2 395 aaPredicted RBP25.1■■□□□ 1.61
CLIC3-203ENST00000494426 DCP1BQ8IZD4 617 aaKnown RBP25.1■■□□□ 1.61
CLIC3-203ENST00000494426 TAF4BQ92750 862 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 SEMA4DQ92854 862 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 PI4K2AQ9BTU6 479 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 SDCBP2Q9H190 292 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 APOBEC3GQ9HC16 384 aaKnown RBP25.1■■□□□ 1.61
CLIC3-203ENST00000494426 METTL14Q9HCE5 456 aaKnown RBP25.1■■□□□ 1.61
CLIC3-203ENST00000494426 HCFC1R1Q9NWW0 138 aa25.1■■□□□ 1.61
CLIC3-203ENST00000494426 DNMT3BQ9UBC3 853 aaKnown RBP25.1■■□□□ 1.61
CLIC3-203ENST00000494426 ATP2C2O75185 946 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 XYLBO75191 536 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 SP100P23497 879 aaPredicted RBP25.09■■□□□ 1.61
CLIC3-203ENST00000494426 CDH8P55286 799 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 TSPY1Q01534 308 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 CBWD6Q4V339 395 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 DCAF17Q5H9S7 520 aaPredicted RBP25.09■■□□□ 1.61
CLIC3-203ENST00000494426 CBWD3Q5JTY5 395 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 CBWD5Q5RIA9 395 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 TCERG1LQ5VWI1 586 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 SMYD3Q9H7B4 428 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.09■■□□□ 1.61
CLIC3-203ENST00000494426 YIPF1Q9Y548 306 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 CLUHO75153 1309 aa25.09■■□□□ 1.61
CLIC3-203ENST00000494426 STX10O60499 249 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 LRG1P02750 347 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 PDGFRBP09619 1106 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 MXI1P50539 228 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 TWF1Q12792 350 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 CCDC40Q4G0X9 1142 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 FAM171BQ6P995 826 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 CEP72Q9P209 647 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 HSFX1Q9UBD0 423 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 GTF3C4Q9UKN8 822 aa25.08■■□□□ 1.61
CLIC3-203ENST00000494426 MYBPHLA2RUH7 354 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 C2CD4DB7Z1M9 353 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 N4BP1O75113 896 aaKnown RBP25.07■■□□□ 1.6
CLIC3-203ENST00000494426 SOAT2O75908 522 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 PCSK1P29120 753 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 SSTR3P32745 418 aaPredicted RBP25.07■■□□□ 1.6
CLIC3-203ENST00000494426 GNL1P36915 607 aaPredicted RBP25.07■■□□□ 1.6
CLIC3-203ENST00000494426 RAP1GAPP47736 663 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 MARSP56192 900 aaKnown RBP25.07■■□□□ 1.6
CLIC3-203ENST00000494426 SMARCB1Q12824 385 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 OR6B3Q8NGW1 331 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 C2orf15Q8WU43 125 aaKnown RBP25.07■■□□□ 1.6
CLIC3-203ENST00000494426 SYT15Q9BQS2 421 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 CRTAC1Q9NQ79 661 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 CDH9Q9ULB4 789 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 USTQ9Y2C2 406 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 COQ4Q9Y3A0 265 aa25.07■■□□□ 1.6
CLIC3-203ENST00000494426 HAPLN1P10915 354 aaPredicted RBP25.06■■□□□ 1.6
CLIC3-203ENST00000494426 ASPAP45381 313 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 PSMC1P62191 440 aaKnown RBP25.06■■□□□ 1.6
CLIC3-203ENST00000494426 SCARA5Q6ZMJ2 495 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 IRF2BP1Q8IU81 584 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 FBXL13Q8NEE6 735 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 SPPL2BQ8TCT7 592 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 KHSRPQ92945 711 aaKnown RBP eCLIP25.06■■□□□ 1.6
CLIC3-203ENST00000494426 DNAJC25Q9H1X3 360 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 SNX25Q9H3E2 840 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 RAB20Q9NX57 234 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 TMEM63CQ9P1W3 806 aa25.06■■□□□ 1.6
CLIC3-203ENST00000494426 TNFRSF10AO00220 468 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 GNA14O95837 355 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 NOP14P78316 857 aaKnown RBP25.05■■□□□ 1.6
CLIC3-203ENST00000494426 NFE2Q16621 373 aaPredicted RBP25.05■■□□□ 1.6
CLIC3-203ENST00000494426 CCDC183Q5T5S1 534 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 TRIM59Q8IWR1 403 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 LPIN3Q9BQK8 851 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 BCO2Q9BYV7 579 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 DPEP3Q9H4B8 488 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 ABI2Q9NYB9 513 aaPredicted RBP25.05■■□□□ 1.6
CLIC3-203ENST00000494426 NR2E1Q9Y466 385 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 PCDHB5Q9Y5E4 795 aa25.05■■□□□ 1.6
CLIC3-203ENST00000494426 CLSTN1O94985 981 aa25.04■■□□□ 1.6
CLIC3-203ENST00000494426 RHOP08100 348 aa25.04■■□□□ 1.6
CLIC3-203ENST00000494426 PTPN2P17706 415 aa25.04■■□□□ 1.6
CLIC3-203ENST00000494426 FSHRP23945 695 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms