RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SV2CQ496J9 727 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 FAM26FQ5R3K3 315 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 SDHAF4Q5VUM1 108 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 CNNM4Q6P4Q7 775 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 VITQ6UXI7 678 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 UNC13DQ70J99 1090 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 GAREM2Q75VX8 874 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 ASCL5Q7RTU5 278 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 FRMD5Q7Z6J6 570 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 OSTM1Q86WC4 334 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 METTL23Q86XA0 190 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 NT5DC4Q86YG4 428 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 GPD1LQ8N335 351 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 ELMOD1Q8N336 334 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 PDCL2Q8N4E4 241 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 RDH13Q8NBN7 331 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 PJA1Q8NG27 643 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 ZSCAN18Q8TBC5 510 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-219ENST00000494069 ZNF507Q8TCN5 953 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 SCFD1Q8WVM8 642 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 ELSPBP1Q96BH3 223 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 LRRC3BQ96PB8 259 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 SEPT5Q99719 369 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-219ENST00000494069 MKNK1Q9BUB5 465 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 CUEDC2Q9H467 287 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 ZFP14Q9HCL3 533 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 SLC39A2Q9NP94 309 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 HEBP1Q9NRV9 189 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 AGPAT3Q9NRZ7 376 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 ABI2Q9NYB9 513 aaPredicted RBP9.2□□□□□ -0.94
LRCH3-219ENST00000494069 HSPBP1Q9NZL4 362 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 DSEQ9UL01 958 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 L1RE1Q9UN81 338 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 SIT1Q9Y3P8 196 aa9.2□□□□□ -0.94
LRCH3-219ENST00000494069 KANSL1LA0AUZ9 987 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 ZNF233A6NK53 670 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 FAM170BA6NMN3 283 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 EIF3DO15371 548 aaKnown RBP eCLIP9.19□□□□□ -0.94
LRCH3-219ENST00000494069 KLRC4O43908 158 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 HAPLN1P10915 354 aaPredicted RBP9.19□□□□□ -0.94
LRCH3-219ENST00000494069 PAX3P23760 479 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 TARSP26639 723 aaKnown RBP9.19□□□□□ -0.94
LRCH3-219ENST00000494069 CYP2J2P51589 502 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 CYP4F8P98187 520 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 AMPD3Q01432 767 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 UBXN2BQ14CS0 331 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 TPRG1Q6ZUI0 275 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 THEM5Q8N1Q8 247 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 SMARCD2Q92925 531 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 PSMG2Q969U7 264 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 ZNF560Q96MR9 790 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 PI4K2AQ9BTU6 479 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 DDX23Q9BUQ8 820 aaKnown RBP9.19□□□□□ -0.94
LRCH3-219ENST00000494069 LRRC27Q9C0I9 530 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 GZF1Q9H116 711 aaPredicted RBP9.19□□□□□ -0.94
LRCH3-219ENST00000494069 SLITRK6Q9H5Y7 841 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 IL21Q9HBE4 155 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 INTS13Q9NVM9 706 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 FAM13BQ9NYF5 915 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 CFAP45Q9UL16 551 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 SNX9Q9Y5X1 595 aa9.19□□□□□ -0.94
LRCH3-219ENST00000494069 ZFHX2Q9C0A1 2572 aaPredicted RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 A0A1B0GVL5 298 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 HEPACAM2A8MVW5 462 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 ACTN4O43707 911 aaKnown RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 GFRA3O60609 400 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 ATP2C2O75185 946 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 CST3P01034 146 aaPredicted RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 TMEM191BP0C7N4 346 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 GABRR2P28476 465 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 GDI1P31150 447 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 PNPLA4P41247 253 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 NBL1P41271 181 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 TUFMP49411 452 aaKnown RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 RBP5P82980 135 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 PFKPQ01813 784 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 PRKCQQ04759 706 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 PLD1Q13393 1074 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 FZD5Q13467 585 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 DDR2Q16832 855 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 SOWAHAQ2M3V2 549 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 ATL3Q6DD88 541 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 STXBP4Q6ZWJ1 553 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 ARID3BQ8IVW6 561 aaPredicted RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 MAML2Q8IZL2 1156 aaPredicted RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 LRRC52Q8N7C0 313 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 LEMD2Q8NC56 503 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 FAM200AQ8TCP9 573 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 PLEKHO2Q8TD55 490 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 CACTINQ8WUQ7 758 aaKnown RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 LEO1Q8WVC0 666 aaPredicted RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 ZNF516Q92618 1163 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 CCDC127Q96BQ5 260 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 PAGE5Q96GU1 130 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 PKMYT1Q99640 499 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 TRMT61BQ9BVS5 477 aaKnown RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
LRCH3-219ENST00000494069 IRF2BPLQ9H1B7 796 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 ATXN3LQ9H3M9 355 aa9.18□□□□□ -0.94
LRCH3-219ENST00000494069 BRD9Q9H8M2 597 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms