RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ARL6IP4Q66PJ3 421 aaKnown RBP8.8□□□□□ -1
HDAC6-234ENST00000493923 CYP26C1Q6V0L0 522 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 MICALCLQ6ZW33 695 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 RSRC2Q7L4I2 434 aaKnown RBP8.8□□□□□ -1
HDAC6-234ENST00000493923 HAUS6Q7Z4H7 955 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 FRMD5Q7Z6J6 570 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 KIAA1328Q86T90 577 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 HS6ST3Q8IZP7 471 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 RNF217Q8TC41 542 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 RAD54LQ92698 747 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 FGF13Q92913 245 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 MIEF2Q96C03 454 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 SGSM3Q96HU1 749 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 CLIC6Q96NY7 704 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 SH3GL3Q99963 347 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 KXD1Q9BQD3 176 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 BPIFA3Q9BQP9 254 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 FOXQ1Q9C009 403 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 MFSD1Q9H3U5 465 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 TBC1D17Q9HA65 648 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 FBXL5Q9UKA1 691 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 FBXL21Q9UKT6 434 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 CDH7Q9ULB5 785 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 BACE2Q9Y5Z0 518 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 STK24Q9Y6E0 443 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 SPTBN2O15020 2390 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 TSC2P49815 1807 aa8.8□□□□□ -1
HDAC6-234ENST00000493923 DCHS1Q96JQ0 3298 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 A0A087X0B3 334 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 VPS37CA5D8V6 355 aaPredicted RBP8.79□□□□□ -1
HDAC6-234ENST00000493923 ANKRD33BA6NCL7 494 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 TULP1O00294 542 aaPredicted RBP8.79□□□□□ -1
HDAC6-234ENST00000493923 SPTLC1O15269 473 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 URI1O94763 535 aaPredicted RBP8.79□□□□□ -1
HDAC6-234ENST00000493923 DCNP07585 359 aaKnown RBP8.79□□□□□ -1
HDAC6-234ENST00000493923 RHOP08100 348 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 SRFP11831 508 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 HOXA9P31269 272 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 CLCN5P51795 746 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 ZNF131P52739 623 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 YARSP54577 528 aaKnown RBP8.79□□□□□ -1
HDAC6-234ENST00000493923 PPP2R3AQ06190 1150 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 IQCB1Q15051 598 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 SLC8B1Q6J4K2 584 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 B4GALNT4Q76KP1 1039 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 CCDC105Q8IYK2 499 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 TTC9BQ8N6N2 239 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 DTWD2Q8NBA8 298 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 DDX12PQ92771 950 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 STAMQ92783 540 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 MCRS1Q96EZ8 462 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 CHAMP1Q96JM3 812 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 SUSD3Q96L08 255 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 UROC1Q96N76 676 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 TMEM209Q96SK2 561 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 FGFBP2Q9BYJ0 223 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 C17orf75Q9HAS0 396 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 TRMT1Q9NXH9 659 aaKnown RBP8.79□□□□□ -1
HDAC6-234ENST00000493923 DLGAP2Q9P1A6 1054 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 CEP72Q9P209 647 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 FBXO2Q9UK22 296 aaPredicted RBP8.79□□□□□ -1
HDAC6-234ENST00000493923 TBX20Q9UMR3 447 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 MTMR6Q9Y217 621 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 MTF2Q9Y483 593 aaPredicted RBP8.79□□□□□ -1
HDAC6-234ENST00000493923 FANCMQ8IYD8 2048 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 MIA3Q5JRA6 1907 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 COL4A2P08572 1712 aa8.79□□□□□ -1
HDAC6-234ENST00000493923 ARHGEF37A1IGU5 675 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 K7ENM7 598 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 GFRA3O60609 400 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 SASH3O75995 380 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 IPO7O95373 1038 aaKnown RBP8.78□□□□□ -1
HDAC6-234ENST00000493923 PIGRP01833 764 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 ADRB2P07550 413 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 GJA1P17302 382 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 CD72P21854 359 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 FCARP24071 287 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 NBL1P41271 181 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 ARHGAP25P42331 645 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 CEBPZQ03701 1054 aaKnown RBP8.78□□□□□ -1
HDAC6-234ENST00000493923 DNM1Q05193 864 aaKnown RBP8.78□□□□□ -1
HDAC6-234ENST00000493923 KCNA1Q09470 495 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 STRN3Q13033 797 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 BIRC2Q13490 618 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 PREPLQ4J6C6 727 aaPredicted RBP8.78□□□□□ -1
HDAC6-234ENST00000493923 CTXN3Q4LDR2 81 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 PABPC1LQ4VXU2 614 aaKnown RBP8.78□□□□□ -1
HDAC6-234ENST00000493923 PRSS36Q5K4E3 855 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 E4F1Q66K89 784 aaPredicted RBP8.78□□□□□ -1
HDAC6-234ENST00000493923 ATL3Q6DD88 541 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 TANGO2Q6ICL3 276 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 JADE1Q6IE81 842 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 LRRC31Q6UY01 552 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 ZPBP2Q6X784 338 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 ANKS3Q6ZW76 656 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 MYCT1Q8N699 235 aa8.78□□□□□ -1
HDAC6-234ENST00000493923 OTUD6BQ8N6M0 293 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms