RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 SLC44A3Q8N4M1 653 aa24.28■■□□□ 1.48
SNIP1-203ENST00000493916 TMC2Q8TDI7 906 aa24.28■■□□□ 1.48
SNIP1-203ENST00000493916 ING5Q8WYH8 240 aa24.28■■□□□ 1.48
SNIP1-203ENST00000493916 PBXIP1Q96AQ6 731 aa24.28■■□□□ 1.48
SNIP1-203ENST00000493916 GTPBP4Q9BZE4 634 aaKnown RBP24.28■■□□□ 1.48
SNIP1-203ENST00000493916 PCSK1P29120 753 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 ATICP31939 592 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 CCR2P41597 374 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 TRPC3Q13507 836 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 NFE2Q16621 373 aaPredicted RBP24.27■■□□□ 1.48
SNIP1-203ENST00000493916 INTS6LQ5JSJ4 861 aaKnown RBP24.27■■□□□ 1.48
SNIP1-203ENST00000493916 ZNF658Q5TYW1 1059 aaPredicted RBP24.27■■□□□ 1.48
SNIP1-203ENST00000493916 TDRD10Q5VZ19 366 aaKnown RBP24.27■■□□□ 1.48
SNIP1-203ENST00000493916 CEP135Q66GS9 1140 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 HS6ST3Q8IZP7 471 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 KBTBD7Q8WVZ9 684 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 TCEAL4Q96EI5 215 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 PKMYT1Q99640 499 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 SEPT5Q99719 369 aaPredicted RBP24.27■■□□□ 1.48
SNIP1-203ENST00000493916 LRRC3Q9BY71 257 aa24.27■■□□□ 1.48
SNIP1-203ENST00000493916 MYO10Q9HD67 2058 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 HAPLN1P10915 354 aaPredicted RBP24.26■■□□□ 1.47
SNIP1-203ENST00000493916 RPL13P26373 211 aaKnown RBP24.26■■□□□ 1.47
SNIP1-203ENST00000493916 ENPEPQ07075 957 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 EDRF1Q3B7T1 1238 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 MGAT5BQ3V5L5 792 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 PARM1Q6UWI2 310 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 TMC8Q8IU68 726 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 SMYD4Q8IYR2 804 aaPredicted RBP24.26■■□□□ 1.47
SNIP1-203ENST00000493916 FGF14Q92915 247 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 SMARCE1Q969G3 411 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 PSMG2Q969U7 264 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 SYAP1Q96A49 352 aaPredicted RBP24.26■■□□□ 1.47
SNIP1-203ENST00000493916 XYLT2Q9H1B5 865 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 VRTNQ9H8Y1 702 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 ABCB6Q9NP58 842 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 TMLHEQ9NVH6 421 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 ABI2Q9NYB9 513 aaPredicted RBP24.26■■□□□ 1.47
SNIP1-203ENST00000493916 HCN4Q9Y3Q4 1203 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 PCDHB5Q9Y5E4 795 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 PCDHA5Q9Y5H7 936 aa24.26■■□□□ 1.47
SNIP1-203ENST00000493916 KINO60870 393 aaKnown RBP24.25■■□□□ 1.47
SNIP1-203ENST00000493916 PHACTR2O75167 634 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 GADD45BO75293 160 aaPredicted RBP24.25■■□□□ 1.47
SNIP1-203ENST00000493916 MOSPD3O75425 235 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 SOAT2O75908 522 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 AKAP3O75969 853 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 C4BPAP04003 597 aaKnown RBP24.25■■□□□ 1.47
SNIP1-203ENST00000493916 FAM163BP0C2L3 166 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 SRFP11831 508 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 WARSP23381 471 aaKnown RBP24.25■■□□□ 1.47
SNIP1-203ENST00000493916 ACAT1P24752 427 aaKnown RBP24.25■■□□□ 1.47
SNIP1-203ENST00000493916 MYL6P60660 151 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 ITIH5Q86UX2 942 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 FBXL6Q8N531 539 aa24.25■■□□□ 1.47
SNIP1-203ENST00000493916 IKBKBO14920 756 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 NARSO43776 548 aaKnown RBP24.24■■□□□ 1.47
SNIP1-203ENST00000493916 TACC1O75410 805 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 MYL4P12829 197 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 ATF6P18850 670 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 TNNC1P63316 161 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 DLG4P78352 724 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 BIRC3Q13489 604 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 VEPH1Q14D04 833 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 WDR72Q3MJ13 1102 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 ZACNQ401N2 412 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 POTEHQ6S545 545 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 INTS8Q75QN2 995 aaKnown RBP24.24■■□□□ 1.47
SNIP1-203ENST00000493916 MCRS1Q96EZ8 462 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 MMS19Q96T76 1030 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 CDH9Q9ULB4 789 aa24.24■■□□□ 1.47
SNIP1-203ENST00000493916 NRG2O14511 850 aaPredicted RBP24.23■■□□□ 1.47
SNIP1-203ENST00000493916 HCRTO43612 131 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 FGF19O95750 216 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 PRCPP42785 496 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 ADAM9Q13443 819 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 NCOA4Q13772 614 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 C1orf220Q5T0J3 134 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 FAM171BQ6P995 826 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 DNAJB7Q7Z6W7 309 aaPredicted RBP24.23■■□□□ 1.47
SNIP1-203ENST00000493916 SUGP1Q8IWZ8 645 aaKnown RBP24.23■■□□□ 1.47
SNIP1-203ENST00000493916 FAM186BQ8IYM0 893 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 SHKBP1Q8TBC3 707 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 ERCC4Q92889 916 aaPredicted RBP24.23■■□□□ 1.47
SNIP1-203ENST00000493916 LPIN3Q9BQK8 851 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 SYT15Q9BQS2 421 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 SLC2A4RGQ9NR83 387 aa24.23■■□□□ 1.47
SNIP1-203ENST00000493916 ARIH1Q9Y4X5 557 aaPredicted RBP24.23■■□□□ 1.47
SNIP1-203ENST00000493916 ECI2O75521 394 aa24.22■■□□□ 1.47
SNIP1-203ENST00000493916 VNN1O95497 513 aa24.22■■□□□ 1.47
SNIP1-203ENST00000493916 PSMC2P35998 433 aaKnown RBP24.22■■□□□ 1.47
SNIP1-203ENST00000493916 VAMP7P51809 220 aa24.22■■□□□ 1.47
SNIP1-203ENST00000493916 MCCD1P59942 119 aaPredicted RBP24.22■■□□□ 1.47
SNIP1-203ENST00000493916 ZNF699Q32M78 642 aa24.22■■□□□ 1.47
SNIP1-203ENST00000493916 CFAP221Q4G0U5 840 aa24.22■■□□□ 1.47
SNIP1-203ENST00000493916 FUBP3Q96I24 572 aaKnown RBP eCLIP24.22■■□□□ 1.47
SNIP1-203ENST00000493916 MKNK1Q9BUB5 465 aa24.22■■□□□ 1.47
SNIP1-203ENST00000493916 RPP25Q9BUL9 199 aaKnown RBP24.22■■□□□ 1.47
SNIP1-203ENST00000493916 WNT16Q9UBV4 365 aa24.22■■□□□ 1.47
SNIP1-203ENST00000493916 RAPGEFL1Q9UHV5 662 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms