RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SYNPO2LQ9H987 977 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 SLAMF7Q9NQ25 335 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 CNNM1Q9NRU3 951 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 KLHL42Q9P2K6 505 aa5.44□□□□□ -1.54
ITGB1-216ENST00000493758 GOLGA6CA6NDK9 693 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 GOLGA6BA6NDN3 693 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 M0QYG6 137 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 TRIAP1O43715 76 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 PEX1O43933 1283 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 CTNND1O60716 968 aaKnown RBP5.43□□□□□ -1.54
ITGB1-216ENST00000493758 KIF20AO95235 890 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 ATXN1LP0C7T5 689 aaKnown RBP5.43□□□□□ -1.54
ITGB1-216ENST00000493758 GOLGA6DP0CG33 693 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 NPR1P16066 1061 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 HDCP19113 662 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 EN2P19622 333 aaPredicted RBP5.43□□□□□ -1.54
ITGB1-216ENST00000493758 ITGALP20701 1170 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 PPIFP30405 207 aaKnown RBP5.43□□□□□ -1.54
ITGB1-216ENST00000493758 LOXL3P58215 753 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 MRPS35P82673 323 aaKnown RBP5.43□□□□□ -1.54
ITGB1-216ENST00000493758 MLC1Q15049 377 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 ERCC6LQ2NKX8 1250 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 CD300EQ496F6 205 aaPredicted RBP5.43□□□□□ -1.54
ITGB1-216ENST00000493758 NPNTQ6UXI9 565 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 MAEAQ7L5Y9 396 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 SRGAP1Q7Z6B7 1085 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 MYO1HQ8N1T3 1032 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 MYCBPAPQ8TBZ2 947 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 LPIN2Q92539 896 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 FAM204AQ9H8W3 233 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 ATP6V0A4Q9HBG4 840 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 MRPS18AQ9NVS2 196 aaKnown RBP5.43□□□□□ -1.54
ITGB1-216ENST00000493758 GOLGA6AQ9NYA3 693 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 L1RE1Q9UN81 338 aa5.43□□□□□ -1.54
ITGB1-216ENST00000493758 A0A087WWL8 130 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 CAPN8A6NHC0 703 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 MYO1FO00160 1098 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 YY2O15391 372 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 SUV39H1O43463 412 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 UNC5CO95185 931 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 CYP2C9P11712 490 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 PPP3CBP16298 524 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 PHKA1P46020 1223 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 GCLCP48506 637 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-216ENST00000493758 SIM1P81133 766 aaPredicted RBP5.42□□□□□ -1.54
ITGB1-216ENST00000493758 CYB5RLQ6IPT4 315 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 SWSAP1Q6NVH7 229 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 CELF5Q8N6W0 485 aaKnown RBP5.42□□□□□ -1.54
ITGB1-216ENST00000493758 NSUN7Q8NE18 718 aaKnown RBP5.42□□□□□ -1.54
ITGB1-216ENST00000493758 ACTRT2Q8TDY3 377 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 ANKS1AQ92625 1134 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 MOGAT1Q96PD6 335 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 NELL2Q99435 816 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 ALG8Q9BVK2 526 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 ZMAT3Q9HA38 289 aaKnown RBP5.42□□□□□ -1.54
ITGB1-216ENST00000493758 RAD54BQ9Y620 910 aa5.42□□□□□ -1.54
ITGB1-216ENST00000493758 A0A1W2PPL8 197 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 ZAR1LA6NP61 321 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 DCLK1O15075 740 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 ZBED1O96006 694 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 GRPP07492 148 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 RARRES1P49788 294 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 TXNRD1Q16881 649 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 GFOD2Q3B7J2 385 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 LONRF3Q496Y0 759 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 TEDDM1Q5T9Z0 273 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 SFRP4Q6FHJ7 346 aaPredicted RBP5.41□□□□□ -1.54
ITGB1-216ENST00000493758 GPR150Q8NGU9 434 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 IL31RAQ8NI17 732 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 SLC30A5Q8TAD4 765 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 PBKQ96KB5 322 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 C22orf23Q9BZE7 217 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 SMOC2Q9H3U7 446 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 LRIT1Q9P2V4 623 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 NOB1Q9ULX3 412 aaKnown RBP5.41□□□□□ -1.54
ITGB1-216ENST00000493758 PCDHA6Q9UN73 950 aa5.41□□□□□ -1.54
ITGB1-216ENST00000493758 G3BP2Q9UN86 482 aaKnown RBP5.41□□□□□ -1.54
ITGB1-216ENST00000493758 ISM1B1AKI9 464 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 CD6P30203 668 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 CXCR5P32302 372 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 CLK3P49761 638 aaKnown RBP5.4□□□□□ -1.54
ITGB1-216ENST00000493758 CACNB3P54284 484 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 CACNA2D1P54289 1103 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 BOP1Q14137 746 aaKnown RBP5.4□□□□□ -1.54
ITGB1-216ENST00000493758 RBM20Q5T481 1227 aaKnown RBP5.4□□□□□ -1.54
ITGB1-216ENST00000493758 GAS2L3Q86XJ1 694 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 B3GALNT2Q8NCR0 500 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 SIMC1Q8NDZ2 872 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 FAM46DQ8NEK8 389 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 SUCLG2Q96I99 432 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 PRDM13Q9H4Q3 707 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 ARMT1Q9H993 441 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 PRDM11Q9NQV5 511 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 KLC4Q9NSK0 619 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 C11orf21Q9P2W6 132 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 INSL6Q9Y581 213 aa5.4□□□□□ -1.54
ITGB1-216ENST00000493758 SALL3Q9BXA9 1300 aa5.4□□□□□ -1.55
ITGB1-216ENST00000493758 A6NNZ2 444 aa5.39□□□□□ -1.55
ITGB1-216ENST00000493758 PPM1GO15355 546 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-216ENST00000493758 XRCC6P12956 609 aaKnown RBP eCLIP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms