RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 RTKNQ9BST9 563 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 SLC46A2Q9BY10 475 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 SMG9Q9H0W8 520 aaKnown RBP18.78■□□□□ 0.6
COL9A1-210ENST00000493682 IKZF4Q9H2S9 585 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 ST6GALNAC4Q9H4F1 302 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 DPP3Q9NY33 737 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 AGO2Q9UKV8 859 aaKnown RBP18.78■□□□□ 0.6
COL9A1-210ENST00000493682 SMC3Q9UQE7 1217 aa18.78■□□□□ 0.6
COL9A1-210ENST00000493682 ANK1P16157 1881 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 LRP3O75074 770 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 CNR2P34972 360 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 DDIT3P35638 169 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 PLCB2Q00722 1185 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 SMARCB1Q12824 385 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 CCINQ13939 588 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 WSCD1Q658N2 575 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 LARP1BQ659C4 914 aaKnown RBP18.77■□□□□ 0.6
COL9A1-210ENST00000493682 HEATR6Q6AI08 1181 aaKnown RBP18.77■□□□□ 0.6
COL9A1-210ENST00000493682 CRELD2Q6UXH1 353 aaPredicted RBP18.77■□□□□ 0.6
COL9A1-210ENST00000493682 LONP2Q86WA8 852 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 THEM5Q8N1Q8 247 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 C2orf15Q8WU43 125 aaKnown RBP18.77■□□□□ 0.6
COL9A1-210ENST00000493682 GCNAQ96QF7 691 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 CCSER1Q9C0I3 900 aa18.77■□□□□ 0.6
COL9A1-210ENST00000493682 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.77■□□□□ 0.6
COL9A1-210ENST00000493682 SCN1AP35498 2009 aa18.76■□□□□ 0.59
COL9A1-210ENST00000493682 HAPLN1P10915 354 aaPredicted RBP18.76■□□□□ 0.59
COL9A1-210ENST00000493682 HOXC13P31276 330 aa18.76■□□□□ 0.59
COL9A1-210ENST00000493682 MCM2P49736 904 aa18.76■□□□□ 0.59
COL9A1-210ENST00000493682 POU5F1Q01860 360 aaKnown RBP18.76■□□□□ 0.59
COL9A1-210ENST00000493682 SF3A1Q15459 793 aaKnown RBP18.76■□□□□ 0.59
COL9A1-210ENST00000493682 TAF12Q16514 161 aa18.76■□□□□ 0.59
COL9A1-210ENST00000493682 ITPRIPL2Q3MIP1 535 aa18.76■□□□□ 0.59
COL9A1-210ENST00000493682 EFCAB13Q8IY85 973 aa18.76■□□□□ 0.59
COL9A1-210ENST00000493682 SYNPOQ8N3V7 929 aa18.76■□□□□ 0.59
COL9A1-210ENST00000493682 KRI1Q8N9T8 703 aaKnown RBP18.76■□□□□ 0.59
COL9A1-210ENST00000493682 SPPL2BQ8TCT7 592 aa18.76■□□□□ 0.59
COL9A1-210ENST00000493682 THG1LQ9NWX6 298 aaKnown RBP18.76■□□□□ 0.59
COL9A1-210ENST00000493682 ABI2Q9NYB9 513 aaPredicted RBP18.76■□□□□ 0.59
COL9A1-210ENST00000493682 KPNA7A9QM74 516 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 ADSSP30520 456 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 HOXA6P31267 233 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 USP49Q70CQ1 688 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 ZNF720Q7Z2F6 126 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 BRAPQ7Z569 592 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.75■□□□□ 0.59
COL9A1-210ENST00000493682 TMEM150AQ86TG1 271 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 SFR1Q86XK3 245 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 CMTM8Q8IZV2 173 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 POMGNT1Q8WZA1 660 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 GKN1Q9NS71 199 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 SEMA4GQ9NTN9 838 aa18.75■□□□□ 0.59
COL9A1-210ENST00000493682 IL18RAPO95256 599 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 HMGA1P17096 107 aaKnown RBP18.74■□□□□ 0.59
COL9A1-210ENST00000493682 CSRP2Q16527 193 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 SV2CQ496J9 727 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 DYMQ7RTS9 669 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 DCP1BQ8IZD4 617 aaKnown RBP18.74■□□□□ 0.59
COL9A1-210ENST00000493682 NETO1Q8TDF5 533 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 HVCN1Q96D96 273 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 EPSTI1Q96J88 318 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 CNTNAP3BQ96NU0 1288 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 FAM83CQ9BQN1 747 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 CNTNAP3Q9BZ76 1288 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 TMLHEQ9NVH6 421 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 ZMYM5Q9UJ78 669 aa18.74■□□□□ 0.59
COL9A1-210ENST00000493682 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.74■□□□□ 0.59
COL9A1-210ENST00000493682 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.73■□□□□ 0.59
COL9A1-210ENST00000493682 SLC30A4O14863 429 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 PPP1R37O75864 691 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 F11P03951 625 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 NLRP12P59046 1061 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 POSTNQ15063 836 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 PRR23CQ6ZRP0 262 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 CEP68Q76N32 757 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 WDR5BQ86VZ2 330 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 NT5DC4Q86YG4 428 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 FAM160A2Q8N612 972 aaPredicted RBP18.73■□□□□ 0.59
COL9A1-210ENST00000493682 MAB21L3Q8N8X9 362 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 USP13Q92995 863 aaPredicted RBP18.73■□□□□ 0.59
COL9A1-210ENST00000493682 ZNF560Q96MR9 790 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 FAM213AQ9BRX8 229 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 STRA6Q9BX79 667 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 HPS4Q9NQG7 708 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 CCL26Q9Y258 94 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 PCDHB5Q9Y5E4 795 aa18.73■□□□□ 0.59
COL9A1-210ENST00000493682 EXTL3O43909 919 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 AVPR1AP37288 418 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 PNPLA4P41247 253 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 GPR15P49685 360 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 WNT7BP56706 349 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 KCNA1Q09470 495 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 RUNX3Q13761 415 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 PTPAQ15257 358 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 PKN3Q6P5Z2 889 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 PI4K2AQ9BTU6 479 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 EBF3Q9H4W6 596 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 MRPL44Q9H9J2 332 aaKnown RBP18.72■□□□□ 0.59
COL9A1-210ENST00000493682 TDP1Q9NUW8 608 aa18.72■□□□□ 0.59
COL9A1-210ENST00000493682 STK17AQ9UEE5 414 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms