RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NOC4LQ9BVI4 516 aaKnown RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 NAPBQ9H115 298 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 GOLPH3Q9H4A6 298 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 GREM2Q9H772 168 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 ZFYVE28Q9HCC9 887 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 NPHS2Q9NP85 383 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 DDX43Q9NXZ2 648 aaKnown RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 CRNNQ9UBG3 495 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 ARPP21Q9UBL0 812 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-205ENST00000493587 KLHL3Q9UH77 587 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 DNAJC16Q9Y2G8 782 aa7.2□□□□□ -1.26
VPS13B-205ENST00000493587 MYOCOSA0A1B0GUC4 107 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 GIPC1O14908 333 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 HAT1O14929 419 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 HNRNPCL1O60812 293 aaKnown RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 BAIAP3O94812 1187 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 IL32P24001 234 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 MCAMP43121 646 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 PHKA2P46019 1235 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 NKX2-5P52952 324 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 AQP4P55087 323 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 NCOA4Q13772 614 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ANKRD20A4Q4UJ75 823 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF746Q6NUN9 644 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF662Q6ZS27 426 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 SMIM5Q71RC9 77 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 CCDC84Q86UT8 332 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ERI1Q8IV48 349 aaKnown RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 CRACR2BQ8N4Y2 399 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 EFHD2Q96C19 240 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 PGBD4Q96DM1 585 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 MTBPQ96DY7 904 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF274Q96GC6 653 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 TSNARE1Q96NA8 513 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 RIOK1Q9BRS2 568 aaKnown RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 THTPAQ9BU02 230 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 TRIM55Q9BYV6 548 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 SEMA4AQ9H3S1 761 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ATP13A3Q9H7F0 1226 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 TRIM39Q9HCM9 518 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 NOC2LQ9Y3T9 749 aaKnown RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 PITPNM2Q9BZ72 1349 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 FAM237AA0A1B0GTK4 181 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ANKRD62A6NC57 917 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 FOXO6A8MYZ6 492 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 PIK3CDO00329 1044 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ABCB1P08183 1280 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 CCDC130P13994 396 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ADORA1P30542 326 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 IREB2P48200 963 aaKnown RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 KCNQ4P56696 695 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 OASLQ15646 514 aaKnown RBP7.19□□□□□ -1.26
VPS13B-205ENST00000493587 CARTPTQ16568 116 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 EXOC3L4Q17RC7 722 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 TMC7Q7Z402 723 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 NUDCD3Q8IVD9 361 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 MIPEPQ99797 713 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 TUBGCP2Q9BSJ2 902 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 C17orf80Q9BSJ5 609 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 EPB41L1Q9H4G0 881 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 VPS37BQ9H9H4 285 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 STMN3Q9NZ72 180 aa7.19□□□□□ -1.26
VPS13B-205ENST00000493587 ZNF536O15090 1300 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GSTTP1A0A1W2PQM5 241 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PPP1R3GB7ZBB8 358 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SNPHO15079 494 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SIN3BO75182 1162 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SEMA3DO95025 777 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 TFAP2AP05549 437 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 HSPD1P10809 573 aaKnown RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PCNAP12004 261 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 ITGA4P13612 1032 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 ECHS1P30084 290 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 TM4SF1P30408 202 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CTSWP56202 376 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 TIMM10P62072 90 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 ESRRGP62508 458 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 FOLH1Q04609 750 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PTPAQ15257 358 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SLC9C1Q4G0N8 1177 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PPP6R3Q5H9R7 873 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SPDYCQ5MJ68 293 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SLC10A5Q5PT55 438 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PERM1Q5SV97 790 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PAOXQ6QHF9 649 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 ACTRT2Q8TDY3 377 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 GDPD5Q8WTR4 605 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PYDC1Q8WXC3 89 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 PHKBQ93100 1093 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 NSL1Q96IY1 281 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MAGEB18Q96M61 343 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CITED4Q96RK1 184 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MXD3Q9BW11 206 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 MRPS26Q9BYN8 205 aaKnown RBP7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SLCO1B3Q9NPD5 702 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 SALL4Q9UJQ4 1053 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 A8MXQ7 604 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 B2RBV5 119 aa7.18□□□□□ -1.26
VPS13B-205ENST00000493587 CFAP99D6REC4 459 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms