RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 AFMP43652 599 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 KRT85P78386 507 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 MYL7Q01449 175 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 PSMD2Q13200 908 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 VEPH1Q14D04 833 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 ANGPT1Q15389 498 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 SNRNP35Q16560 246 aaKnown RBP12.36□□□□□ -0.43
LRTM1-202ENST00000493075 KNOP1Q1ED39 458 aaKnown RBP12.36□□□□□ -0.43
LRTM1-202ENST00000493075 MGAT5BQ3V5L5 792 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 LIMS2Q7Z4I7 341 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 MFSD6LQ8IWD5 586 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 XXYLT1Q8NBI6 393 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 PJA1Q8NG27 643 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 GOLGA5Q8TBA6 731 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 ZSCAN18Q8TBC5 510 aaPredicted RBP12.36□□□□□ -0.43
LRTM1-202ENST00000493075 NOC3LQ8WTT2 800 aaKnown RBP12.36□□□□□ -0.43
LRTM1-202ENST00000493075 IRF7Q92985 503 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 PAGE5Q96GU1 130 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 MTMR12Q9C0I1 747 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 SLC39A2Q9NP94 309 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 SERTAD1Q9UHV2 236 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 ZMYM5Q9UJ78 669 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 HPSEQ9Y251 543 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 PCDHB5Q9Y5E4 795 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 ATP6V1DQ9Y5K8 247 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 SNX9Q9Y5X1 595 aa12.36□□□□□ -0.43
LRTM1-202ENST00000493075 PDCD11Q14690 1871 aaKnown RBP12.35□□□□□ -0.43
LRTM1-202ENST00000493075 KMT2EQ8IZD2 1858 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 A0A1W2PRU2 124 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 TULP1O00294 542 aaPredicted RBP12.35□□□□□ -0.43
LRTM1-202ENST00000493075 KLRC4O43908 158 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 KRT19P08727 400 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 GJA1P17302 382 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 ATF6P18850 670 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 CASP1P29466 404 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 MAGEA9P43362 315 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 MLLT6P55198 1093 aaPredicted RBP12.35□□□□□ -0.43
LRTM1-202ENST00000493075 BFSP1Q12934 665 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 PSMD6Q15008 389 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 ARHGAP15Q53QZ3 475 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 VITQ6UXI7 678 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 GAREM2Q75VX8 874 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 TRAPPC11Q7Z392 1133 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 OR5B17Q8NGF7 314 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 FAM200AQ8TCP9 573 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 HPDLQ96IR7 371 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 SPATA32Q96LK8 384 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 SEPT5Q99719 369 aaPredicted RBP12.35□□□□□ -0.43
LRTM1-202ENST00000493075 SCAND2PQ9GZW5 306 aaPredicted RBP12.35□□□□□ -0.43
LRTM1-202ENST00000493075 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 BRD9Q9H8M2 597 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 ZNF334Q9HCZ1 680 aaPredicted RBP12.35□□□□□ -0.43
LRTM1-202ENST00000493075 FAM86C1Q9NVL1 165 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 DDX43Q9NXZ2 648 aaKnown RBP12.35□□□□□ -0.43
LRTM1-202ENST00000493075 OBP2AQ9NY56 170 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 DOCK8Q8NF50 2099 aa12.35□□□□□ -0.43
LRTM1-202ENST00000493075 A0A1B0GVL5 298 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 FAM170BA6NMN3 283 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 HEPACAM2A8MVW5 462 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 MAN2B1O00754 1011 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 CLIC2O15247 247 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 NCAM2O15394 837 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 SOAT2O75908 522 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 DCNP07585 359 aaKnown RBP12.34□□□□□ -0.43
LRTM1-202ENST00000493075 GLULP15104 373 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 PFKFB1P16118 471 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 GABRR2P28476 465 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 PCSK1P29120 753 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 CDC25CP30307 473 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 VIPR2P41587 438 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 RPL10AP62906 217 aaKnown RBP12.34□□□□□ -0.43
LRTM1-202ENST00000493075 CYP24A1Q07973 514 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 FCHO2Q0JRZ9 810 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 TAF12Q16514 161 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 SOWAHAQ2M3V2 549 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 INTS6LQ5JSJ4 861 aaKnown RBP12.34□□□□□ -0.43
LRTM1-202ENST00000493075 SCARA3Q6AZY7 606 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 ZNF852Q6ZMS4 543 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 C1orf210Q8IVY1 113 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 ADGRF2Q8IZF7 708 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 RDH13Q8NBN7 331 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 CLDN23Q96B33 292 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 FUBP3Q96I24 572 aaKnown RBP eCLIP12.34□□□□□ -0.43
LRTM1-202ENST00000493075 FNBP1Q96RU3 617 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 PKMYT1Q99640 499 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 LPIN3Q9BQK8 851 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 BCO2Q9BYV7 579 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 FOXQ1Q9C009 403 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 SLITRK6Q9H5Y7 841 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 TASP1Q9H6P5 420 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 LTB4R2Q9NPC1 389 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 TMLHEQ9NVH6 421 aa12.34□□□□□ -0.43
LRTM1-202ENST00000493075 ABI2Q9NYB9 513 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms