RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-205ENST00000492851 RPL10AP62906 217 aaKnown RBP13.41□□□□□ -0.26
COL6A1-205ENST00000492851 LRRC32Q14392 662 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 GPR158Q5T848 1215 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 GAREM2Q75VX8 874 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 RALGPS2Q86X27 583 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-205ENST00000492851 TMEM130Q8N3G9 435 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 CSGALNACT2Q8N6G5 542 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 PDILTQ8N807 584 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 LEO1Q8WVC0 666 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-205ENST00000492851 SAAL1Q96ER3 474 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 ANKRD36BP1Q96IX9 119 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 TMEM209Q96SK2 561 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 LMAN1LQ9HAT1 526 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 MAGEF1Q9HAY2 307 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 ABCB6Q9NP58 842 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 KBTBD4Q9NVX7 518 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
COL6A1-205ENST00000492851 NOTCH4Q99466 2003 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 MYO15AQ9UKN7 3530 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 PDCD11Q14690 1871 aaKnown RBP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 EIF3DO15371 548 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 TNNC2P02585 160 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 HSP90AA1P07900 732 aaKnown RBP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 KRT19P08727 400 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 TMEM191BP0C7N4 346 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 CSH1P0DML2 217 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 CSH2P0DML3 217 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 PCSK1P29120 753 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 POLR2BP30876 1174 aaKnown RBP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 CCR3P51677 355 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 CASP5P51878 434 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 AMPD2Q01433 879 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 FZD5Q13467 585 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 DUOXA2Q1HG44 320 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 DGKKQ5KSL6 1271 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 CNNM4Q6P4Q7 775 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 LRRTM3Q86VH5 581 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 SYNPOQ8N3V7 929 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 TOP6BLQ8N6T0 577 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 CELF5Q8N6W0 485 aaKnown RBP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 C1orf127Q8N9H9 656 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 ZBTB44Q8NCP5 570 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 BPIFB1Q8TDL5 484 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 NELL1Q92832 810 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 CHRDQ9H2X0 955 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 ABI2Q9NYB9 513 aaPredicted RBP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 UXTQ9UBK9 157 aaPredicted RBP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 CFAP45Q9UL16 551 aa13.4□□□□□ -0.26
COL6A1-205ENST00000492851 NDRG2Q9UN36 371 aaKnown RBP13.4□□□□□ -0.26
COL6A1-205ENST00000492851 MYH15Q9Y2K3 1946 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 ARNTLO00327 626 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
COL6A1-205ENST00000492851 PRPF6O94906 941 aaKnown RBP13.39□□□□□ -0.27
COL6A1-205ENST00000492851 CCNE1P24864 410 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 AVPR1AP37288 418 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 ID4P47928 161 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 MTAPQ13126 283 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 MAPRE1Q15691 268 aaKnown RBP13.39□□□□□ -0.27
COL6A1-205ENST00000492851 ERMP1Q7Z2K6 904 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 ZNF687Q8N1G0 1237 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
COL6A1-205ENST00000492851 EXOC4Q96A65 974 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 FUBP3Q96I24 572 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL6A1-205ENST00000492851 CEP295NLQ96MC4 621 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 CBWD1Q9BRT8 395 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 TRIM9Q9C026 710 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 IKZF4Q9H2S9 585 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 PCIF1Q9H4Z3 704 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 PRMT8Q9NR22 394 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-205ENST00000492851 INTS13Q9NVM9 706 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 FAM13BQ9NYF5 915 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 CGNQ9P2M7 1197 aaKnown RBP13.39□□□□□ -0.27
COL6A1-205ENST00000492851 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
COL6A1-205ENST00000492851 SNX9Q9Y5X1 595 aa13.39□□□□□ -0.27
COL6A1-205ENST00000492851 A0A087X0B3 334 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 SHISA7A6NL88 538 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 SOAT2O75908 522 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 FAM163BP0C2L3 166 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 CHRNB1P11230 501 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 ATF6P18850 670 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 SDHBP21912 280 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 CXCL12P48061 93 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 BFSP1Q12934 665 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 E2F4Q16254 413 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 C4orf50Q6ZRC1 276 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 CMTM8Q8IZV2 173 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 TTC9BQ8N6N2 239 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 GIPC2Q8TF65 315 aa13.38□□□□□ -0.27
COL6A1-205ENST00000492851 MRPS31Q92665 395 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms