RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 LRRTM3Q86VH5 581 aa25.44■■□□□ 1.66
CTDSP1-211ENST00000492545 TMC8Q8IU68 726 aa25.44■■□□□ 1.66
CTDSP1-211ENST00000492545 GRAMD1CQ8IYS0 662 aa25.44■■□□□ 1.66
CTDSP1-211ENST00000492545 SEPT5Q99719 369 aaPredicted RBP25.44■■□□□ 1.66
CTDSP1-211ENST00000492545 L1RE1Q9UN81 338 aa25.44■■□□□ 1.66
CTDSP1-211ENST00000492545 PCDHB5Q9Y5E4 795 aa25.44■■□□□ 1.66
CTDSP1-211ENST00000492545 SNX9Q9Y5X1 595 aa25.44■■□□□ 1.66
CTDSP1-211ENST00000492545 CLIC2O15247 247 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 PI15O43692 258 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 SLC44A4Q53GD3 710 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 POTEHQ6S545 545 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 CCDC105Q8IYK2 499 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 RDH13Q8NBN7 331 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 OR5B17Q8NGF7 314 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 SHKBP1Q8TBC3 707 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 HPDLQ96IR7 371 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 ABCB6Q9NP58 842 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 DDX43Q9NXZ2 648 aaKnown RBP25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 SIT1Q9Y3P8 196 aa25.43■■□□□ 1.66
CTDSP1-211ENST00000492545 HAPLN1P10915 354 aaPredicted RBP25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 TNNI1P19237 187 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 FCARP24071 287 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 PCSK1P29120 753 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 CYP2J2P51589 502 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 CYP24A1Q07973 514 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 TEAD2Q15562 447 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 TRAPPC11Q7Z392 1133 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 TTC9BQ8N6N2 239 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 FAM200AQ8TCP9 573 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 DEPDC1BQ8WUY9 529 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 ATOH1Q92858 354 aaPredicted RBP25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 CCDC47Q96A33 483 aaKnown RBP25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 ZSWIM3Q96MP5 696 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 ZMYM5Q9UJ78 669 aa25.42■■□□□ 1.66
CTDSP1-211ENST00000492545 GABRDO14764 452 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 EXOC3O60645 756 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 KIF20AO95235 890 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 FAM163BP0C2L3 166 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 DLATP10515 647 aaKnown RBP25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 STK4Q13043 487 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 MLF2Q15773 248 aaPredicted RBP25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 TAF12Q16514 161 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 KMT5BQ4FZB7 885 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 LIMS2Q7Z4I7 341 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 SLC9A9Q8IVB4 645 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 DTWD2Q8NBA8 298 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 ZSCAN18Q8TBC5 510 aaPredicted RBP25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 DNASE1L2Q92874 299 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 CCDC34Q96HJ3 373 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 CGRRF1Q99675 332 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 DDX23Q9BUQ8 820 aaKnown RBP25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 TRMT61BQ9BVS5 477 aaKnown RBP25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 PLA2G2FQ9BZM2 168 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 SLITRK6Q9H5Y7 841 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 TRPV5Q9NQA5 729 aa25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 ABI2Q9NYB9 513 aaPredicted RBP25.41■■□□□ 1.66
CTDSP1-211ENST00000492545 PTPRJQ12913 1337 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 A0A1W2PRU2 124 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 PSMC3P17980 439 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 NDUFA8P51970 172 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 SNW1Q13573 536 aaKnown RBP25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 SOWAHAQ2M3V2 549 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 ARHGAP15Q53QZ3 475 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 INTS6LQ5JSJ4 861 aaKnown RBP25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 LMBRD2Q68DH5 695 aaPredicted RBP25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 ADGRF2Q8IZF7 708 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 IRF7Q92985 503 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 CCDC127Q96BQ5 260 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 NELL2Q99435 816 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 OSBPL6Q9BZF3 934 aa25.4■■□□□ 1.66
CTDSP1-211ENST00000492545 KANSL1LA0AUZ9 987 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 H0Y858 1186 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 SOAT2O75908 522 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 GJA1P17302 382 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 ATF6P18850 670 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 WEE1P30291 646 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 CDC25CP30307 473 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 AP3M2P53677 418 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 GAREM2Q75VX8 874 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 KIAA0895Q8NCT3 520 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 GCNAQ96QF7 691 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 ATXN3LQ9H3M9 355 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 BRD9Q9H8M2 597 aa25.39■■□□□ 1.66
CTDSP1-211ENST00000492545 TSC2P49815 1807 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 PDXKO00764 312 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 RPN1P04843 607 aaKnown RBP25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 GABRR2P28476 465 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 MRE11P49959 708 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 RPL10AP62906 217 aaKnown RBP25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 NUCB2P80303 420 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 ALYREFQ86V81 257 aaKnown RBP25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 MFSD6LQ8IWD5 586 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 FSIP1Q8NA03 581 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 PJA1Q8NG27 643 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 FUBP3Q96I24 572 aaKnown RBP eCLIP25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 FAM84AQ96KN4 292 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 DMAC2Q9NW81 257 aa25.38■■□□□ 1.65
CTDSP1-211ENST00000492545 NRG2O14511 850 aaPredicted RBP25.37■■□□□ 1.65
CTDSP1-211ENST00000492545 STAU1O95793 577 aaKnown RBP25.37■■□□□ 1.65
CTDSP1-211ENST00000492545 MAPRE1Q15691 268 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms