RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 PPM1LQ5SGD2 360 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 SPOPLQ6IQ16 392 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 FAM171BQ6P995 826 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 POTEHQ6S545 545 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 CCDC149Q6ZUS6 474 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 FRMD5Q7Z6J6 570 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 RIPOR3Q96MK2 946 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 NECTIN4Q96NY8 510 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 PI4K2AQ9BTU6 479 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 SMYD3Q9H7B4 428 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 CYP4F11Q9HBI6 524 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 HCFC1R1Q9NWW0 138 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 DDX43Q9NXZ2 648 aaKnown RBP16.28■□□□□ 0.2
SS18L1-204ENST00000491916 DNMT3BQ9UBC3 853 aaKnown RBP16.28■□□□□ 0.2
SS18L1-204ENST00000491916 INSL5Q9Y5Q6 135 aa16.28■□□□□ 0.2
SS18L1-204ENST00000491916 ATP2C2O75185 946 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 LHX1P48742 406 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 CDH8P55286 799 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 MARSP56192 900 aaKnown RBP16.27■□□□□ 0.2
SS18L1-204ENST00000491916 NTHL1P78549 312 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 SGSM1Q2NKQ1 1148 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 ZNF699Q32M78 642 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 LIN9Q5TKA1 542 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 THEM5Q8N1Q8 247 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 SRRTQ9BXP5 876 aaKnown RBP16.27■□□□□ 0.2
SS18L1-204ENST00000491916 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 TMEM63CQ9P1W3 806 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 CEP72Q9P209 647 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 NXF1Q9UBU9 619 aaKnown RBP16.27■□□□□ 0.2
SS18L1-204ENST00000491916 ARMCX3Q9UH62 379 aaPredicted RBP16.27■□□□□ 0.2
SS18L1-204ENST00000491916 SLC27A5Q9Y2P5 690 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 COQ4Q9Y3A0 265 aa16.27■□□□□ 0.2
SS18L1-204ENST00000491916 MYBPHLA2RUH7 354 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 C2CD4DB7Z1M9 353 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 SOAT2O75908 522 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 ASPAP45381 313 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 INTS6LQ5JSJ4 861 aaKnown RBP16.26■□□□□ 0.19
SS18L1-204ENST00000491916 KRT39Q6A163 491 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 ELMSAN1Q6PJG2 1045 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 GRASPQ7Z6J2 395 aaPredicted RBP16.26■□□□□ 0.19
SS18L1-204ENST00000491916 TRIM59Q8IWR1 403 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 GJD3Q8N144 294 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 TAF4BQ92750 862 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 LPIN3Q9BQK8 851 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 LRRC3Q9BY71 257 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 MMRN2Q9H8L6 949 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 CRTAC1Q9NQ79 661 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 HSFX1Q9UBD0 423 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 YIPF1Q9Y548 306 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 MYO10Q9HD67 2058 aa16.26■□□□□ 0.19
SS18L1-204ENST00000491916 PTPRDP23468 1912 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 CLUHO75153 1309 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 PRRG1O14668 218 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 PMM2O15305 246 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 MBD3O95983 291 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 PDGFRBP09619 1106 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 ELF1P32519 619 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 PIK3CAP42336 1068 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 RAP1GAPP47736 663 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 TNNC1P63316 161 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 TWF1Q12792 350 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 ZNF667Q5HYK9 610 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 BCO2Q9BYV7 579 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 DPEP3Q9H4B8 488 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 METTL14Q9HCE5 456 aaKnown RBP16.25■□□□□ 0.19
SS18L1-204ENST00000491916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.25■□□□□ 0.19
SS18L1-204ENST00000491916 GTF3C4Q9UKN8 822 aa16.25■□□□□ 0.19
SS18L1-204ENST00000491916 R3HCC1Q9Y3T6 440 aaKnown RBP16.25■□□□□ 0.19
SS18L1-204ENST00000491916 HAPLN1P10915 354 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-204ENST00000491916 ATF6P18850 670 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 SP100P23497 879 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-204ENST00000491916 ERCC5P28715 1186 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-204ENST00000491916 PCSK1P29120 753 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 GNL1P36915 607 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-204ENST00000491916 CCR2P41597 374 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 MXI1P50539 228 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 MYL7Q01449 175 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 SMARCB1Q12824 385 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 SLC5A9Q2M3M2 681 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 DCAF17Q5H9S7 520 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-204ENST00000491916 DCP1BQ8IZD4 617 aaKnown RBP16.24■□□□□ 0.19
SS18L1-204ENST00000491916 LMO3Q8TAP4 145 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 ITFG1Q8TB96 612 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 C2orf15Q8WU43 125 aaKnown RBP16.24■□□□□ 0.19
SS18L1-204ENST00000491916 MYADMQ96S97 322 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 SYT15Q9BQS2 421 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 AVENQ9NQS1 362 aaPredicted RBP16.24■□□□□ 0.19
SS18L1-204ENST00000491916 RAB20Q9NX57 234 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 CDH9Q9ULB4 789 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 USTQ9Y2C2 406 aa16.24■□□□□ 0.19
SS18L1-204ENST00000491916 DLL1O00548 723 aa16.23■□□□□ 0.19
SS18L1-204ENST00000491916 STX10O60499 249 aa16.23■□□□□ 0.19
SS18L1-204ENST00000491916 XYLBO75191 536 aa16.23■□□□□ 0.19
SS18L1-204ENST00000491916 MOSPD3O75425 235 aa16.23■□□□□ 0.19
SS18L1-204ENST00000491916 RHOP08100 348 aa16.23■□□□□ 0.19
SS18L1-204ENST00000491916 FMO5P49326 533 aa16.23■□□□□ 0.19
SS18L1-204ENST00000491916 EPHA5P54756 1037 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms