RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 PLS3P13797 630 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 MPLP40238 635 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 MCM2P49736 904 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 PLK5Q496M5 336 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 DSTYKQ6XUX3 929 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 USP37Q86T82 979 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 LRRTM3Q86VH5 581 aa14.36□□□□□ -0.11
USF1-206ENST00000491629 C12orf50Q8NA57 414 aaPredicted RBP14.36□□□□□ -0.11
USF1-206ENST00000491629 DUSP15Q9H1R2 295 aaPredicted RBP14.36□□□□□ -0.11
USF1-206ENST00000491629 C1QTNF9BB2RNN3 333 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 RNF40O75150 1001 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 PROS1P07225 676 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 C1QTNF9P0C862 333 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 HOXB3P14651 431 aaPredicted RBP14.35□□□□□ -0.11
USF1-206ENST00000491629 ARSAP15289 507 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 U2AF2P26368 475 aaKnown RBP eCLIP14.35□□□□□ -0.11
USF1-206ENST00000491629 NMT1P30419 496 aaKnown RBP14.35□□□□□ -0.11
USF1-206ENST00000491629 TRAPPC10P48553 1259 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 STRN3Q13033 797 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 SLC39A12Q504Y0 691 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 ARHGAP15Q53QZ3 475 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 SPATA1Q5VX52 437 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 SLC39A4Q6P5W5 647 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 HAUS6Q7Z4H7 955 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 CCDC83Q8IWF9 413 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 CMTM8Q8IZV2 173 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 STKLD1Q8NE28 680 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 LRRC15Q8TF66 581 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 USP13Q92995 863 aaPredicted RBP14.35□□□□□ -0.11
USF1-206ENST00000491629 HHIPQ96QV1 700 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 TMEM121BQ9BXQ6 578 aaPredicted RBP14.35□□□□□ -0.11
USF1-206ENST00000491629 ZCWPW1Q9H0M4 648 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 EBF3Q9H4W6 596 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 HSFX1Q9UBD0 423 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 PLXND1Q9Y4D7 1925 aa14.35□□□□□ -0.11
USF1-206ENST00000491629 ANO9A1A5B4 782 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 ANTXRLA6NF34 631 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 PIRO00625 290 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 FGF19O95750 216 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 TOP3BO95985 862 aaKnown RBP14.34□□□□□ -0.11
USF1-206ENST00000491629 F11P03951 625 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 CYP11A1P05108 521 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 CCDC192P0DO97 292 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 HMGA1P17096 107 aaKnown RBP14.34□□□□□ -0.11
USF1-206ENST00000491629 SLC12A3P55017 1021 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 NCKAP1LP55160 1127 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 PPP2R3AQ06190 1150 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 RUNX3Q13761 415 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 HYIQ5T013 277 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 C9orf57Q5W0N0 161 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 KRT79Q5XKE5 535 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 JADE1Q6IE81 842 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 PSAPL1Q6NUJ1 521 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 ITIH5Q86UX2 942 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 SYT2Q8N9I0 419 aaPredicted RBP14.34□□□□□ -0.11
USF1-206ENST00000491629 GIPC2Q8TF65 315 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 KCNN1Q92952 543 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 PLIN2Q99541 437 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 SEPT5Q99719 369 aaPredicted RBP14.34□□□□□ -0.11
USF1-206ENST00000491629 TIPINQ9BVW5 301 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 PCDHGA5Q9Y5G8 931 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 FREM2Q5SZK8 3169 aa14.34□□□□□ -0.11
USF1-206ENST00000491629 AKAP3O75969 853 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 NFICP08651 508 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 ODC1P11926 461 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 GALK1P51570 392 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 RNF43Q68DV7 783 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 TXNDC8Q6A555 127 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 MAB21L3Q8N8X9 362 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.33□□□□□ -0.12
USF1-206ENST00000491629 VPS45Q9NRW7 570 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 TMLHEQ9NVH6 421 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 TBX20Q9UMR3 447 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 SLC8A2Q9UPR5 921 aa14.33□□□□□ -0.12
USF1-206ENST00000491629 C4orf47A7E2U8 309 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 OGTO15294 1046 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 TADA3O75528 432 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 HAPLN1P10915 354 aaPredicted RBP14.32□□□□□ -0.12
USF1-206ENST00000491629 SPINK2P20155 84 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 CDC25CP30307 473 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 PRPHP41219 470 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 MATR3P43243 847 aaKnown RBP eCLIP14.32□□□□□ -0.12
USF1-206ENST00000491629 GPR15P49685 360 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 NLRP12P59046 1061 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 GRSF1Q12849 480 aaKnown RBP eCLIP14.32□□□□□ -0.12
USF1-206ENST00000491629 MGAT5BQ3V5L5 792 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 ARMCX5Q6P1M9 558 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 CAMKK1Q8N5S9 505 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 CPSF3Q9UKF6 684 aaKnown RBP14.32□□□□□ -0.12
USF1-206ENST00000491629 ZMIZ1Q9ULJ6 1067 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
USF1-206ENST00000491629 SMG1Q96Q15 3661 aaKnown RBP14.31□□□□□ -0.12
USF1-206ENST00000491629 A0A0B4J269 797 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 LNP1A1A4G5 178 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 BCLAF3A2AJT9 711 aaKnown RBP14.31□□□□□ -0.12
USF1-206ENST00000491629 TISP43B9A030 160 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 ATG13O75143 517 aa14.31□□□□□ -0.12
USF1-206ENST00000491629 SEC24BO95487 1268 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms