RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 EBF1Q9UH73 591 aa12.13□□□□□ -0.47
CLCNKA-206ENST00000491433 ZNF638Q14966 1978 aaKnown RBP12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 CELSR3Q9NYQ7 3312 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 PFKFB2O60825 505 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 APBB3O95704 486 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 TYMPP19971 482 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 CYP3A5P20815 502 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 DDX6P26196 483 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 TNK2Q07912 1038 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 STXBP5Q5T5C0 1151 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 CENPPQ6IPU0 288 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 FSTL4Q6MZW2 842 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 CC2D1AQ6P1N0 951 aaPredicted RBP12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 SYT13Q7L8C5 426 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 C18orf25Q96B23 403 aaPredicted RBP12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 PGLYRP2Q96PD5 576 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 C17orf75Q9HAS0 396 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 GKN1Q9NS71 199 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 GJB4Q9NTQ9 266 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 RAXQ9Y2V3 346 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 APC2O95996 2303 aa12.12□□□□□ -0.47
CLCNKA-206ENST00000491433 LNP1A1A4G5 178 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 MTMR11A4FU01 709 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 RNF40O75150 1001 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 PROZP22891 400 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 LRPAP1P30533 357 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 GBP1P32455 592 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 MCM7P33993 719 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 AVPR1AP37288 418 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 DPP6P42658 865 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 PEX3P56589 373 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 SMARCB1Q12824 385 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 LMAN2Q12907 356 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 BFSP1Q12934 665 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 STRN3Q13033 797 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 ANKRD1Q15327 319 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 USP39Q53GS9 565 aaKnown RBP12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 OVOS1Q6IE37 1185 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 TCEAL6Q6IPX3 200 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 DIS3L2Q8IYB7 885 aaKnown RBP12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 CMTM8Q8IZV2 173 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 TCEAL3Q969E4 200 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 LRRC3BQ96PB8 259 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 FAM83CQ9BQN1 747 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 TARS2Q9BW92 718 aaKnown RBP12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 BHMT2Q9H2M3 363 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 KMT5AQ9NQR1 393 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 ARHGAP28Q9P2N2 729 aa12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 UBQLN1Q9UMX0 589 aaKnown RBP12.11□□□□□ -0.47
CLCNKA-206ENST00000491433 ATG2BQ96BY7 2078 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 DENND4CQ5VZ89 1909 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 BTBD18B2RXH4 712 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 CAPN9O14815 690 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 TOM1L1O75674 476 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 VNN2O95498 520 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 OR4Q2P0C623 313 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 ODC1P11926 461 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 CCT6AP40227 531 aaKnown RBP12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 NPTX2P47972 431 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 NOLC1Q14978 699 aaKnown RBP eCLIP12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 PDGFRLQ15198 375 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 KYAT1Q16773 422 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 PKN3Q6P5Z2 889 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 GPIHBP1Q8IV16 184 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 DEFB124Q8NES8 71 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 C2orf15Q8WU43 125 aaKnown RBP12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 HHIPQ96QV1 700 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 P2RY13Q9BPV8 354 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 TIPINQ9BVW5 301 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 SLC27A5Q9Y2P5 690 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 LAMA1P25391 3075 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 THADAQ6YHU6 1953 aa12.1□□□□□ -0.47
CLCNKA-206ENST00000491433 CLDN3O15551 220 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 PRAMEF12O95522 483 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 EGFP01133 1207 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 HARSP12081 509 aaKnown RBP12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 DGKEP52429 567 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 SMTNP53814 917 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 PPP2R3AQ06190 1150 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 NR1H3Q13133 447 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 DMC1Q14565 340 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 SLC10A6Q3KNW5 377 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 PMS2CLQ68D20 193 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 ZPBP2Q6X784 338 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 CYP2U1Q7Z449 544 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 CPA6Q8N4T0 437 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 ATAD1Q8NBU5 361 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 RPLP0P6Q8NHW5 317 aa12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 NUSAP1Q9BXS6 441 aaKnown RBP12.09□□□□□ -0.47
CLCNKA-206ENST00000491433 CRISPLD1Q9H336 500 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms