RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 LBX1P52954 281 aa14.79□□□□□ -0.04
SMPD4-219ENST00000491128 PTP4A2Q12974 167 aa14.79□□□□□ -0.04
SMPD4-219ENST00000491128 FAM26DQ5JW98 314 aa14.79□□□□□ -0.04
SMPD4-219ENST00000491128 DEFB128Q7Z7B8 93 aa14.79□□□□□ -0.04
SMPD4-219ENST00000491128 UBXN4Q92575 508 aa14.79□□□□□ -0.04
SMPD4-219ENST00000491128 CPXM1Q96SM3 734 aa14.79□□□□□ -0.04
SMPD4-219ENST00000491128 NT5C1AQ9BXI3 368 aa14.79□□□□□ -0.04
SMPD4-219ENST00000491128 O00370 1275 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 CD4P01730 458 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 ITGB1P05556 798 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 TAF6P49848 677 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 MNX1P50219 401 aaPredicted RBP14.78□□□□□ -0.04
SMPD4-219ENST00000491128 TERF1P54274 439 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 PTPN20Q4JDL3 420 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 WSCD1Q658N2 575 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 RHOT2Q8IXI1 618 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 LRRC52Q8N7C0 313 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 HCSTQ9UBK5 93 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 TSPAN16Q9UKR8 245 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 OGDHLQ9ULD0 1010 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 CDH23Q9H251 3354 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 CTAGE15A4D2H0 777 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 CTAGE8P0CG41 777 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 ADORA2BP29275 332 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 CYP2C18P33260 490 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 BRCC3P46736 316 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 YWHAEP62258 255 aaKnown RBP14.78□□□□□ -0.04
SMPD4-219ENST00000491128 MAMLD1Q13495 774 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 TRIM60Q495X7 471 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 SLFN11Q7Z7L1 901 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 CTAGE6Q86UF2 777 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 OSTM1Q86WC4 334 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 ECHDC2Q86YB7 292 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 ZNF280BQ86YH2 543 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 CTAGE4Q8IX94 777 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 ALG3Q92685 438 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 AMFRQ9UKV5 643 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 USTQ9Y2C2 406 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 STXBP5LQ9Y2K9 1186 aa14.78□□□□□ -0.04
SMPD4-219ENST00000491128 PODXLO00592 558 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 CYB561D2O14569 222 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 CEP104O60308 925 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 SELPP16109 830 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 MMP8P22894 467 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 GJC1P36383 396 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 GNL1P36915 607 aaPredicted RBP14.77□□□□□ -0.04
SMPD4-219ENST00000491128 INCA1Q0VD86 236 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 IFI16Q16666 785 aaKnown RBP14.77□□□□□ -0.04
SMPD4-219ENST00000491128 WHAMMP3Q1A5X7 153 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 CCDC181Q5TID7 509 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 DCAF12L1Q5VU92 463 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 ERICH1Q86X53 443 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 PDCL2Q8N4E4 241 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 TMEM35BQ8NCS4 154 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 APPL2Q8NEU8 664 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 CYP3A43Q9HB55 503 aa14.77□□□□□ -0.04
SMPD4-219ENST00000491128 ZMYND10O75800 440 aa14.77□□□□□ -0.05
SMPD4-219ENST00000491128 B3GAT3O94766 335 aa14.77□□□□□ -0.05
SMPD4-219ENST00000491128 TLE2Q04725 743 aa14.77□□□□□ -0.05
SMPD4-219ENST00000491128 GOLGA7BQ2TAP0 167 aa14.77□□□□□ -0.05
SMPD4-219ENST00000491128 SGO2Q562F6 1265 aa14.77□□□□□ -0.05
SMPD4-219ENST00000491128 PIWIL1Q96J94 861 aaKnown RBP14.77□□□□□ -0.05
SMPD4-219ENST00000491128 MCEEQ96PE7 176 aa14.77□□□□□ -0.05
SMPD4-219ENST00000491128 ABCB6Q9NP58 842 aa14.77□□□□□ -0.05
SMPD4-219ENST00000491128 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.77□□□□□ -0.05
SMPD4-219ENST00000491128 ATP11BQ9Y2G3 1177 aa14.77□□□□□ -0.05
SMPD4-219ENST00000491128 CLDN5O00501 218 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 HUS1O60921 280 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 GRAP2O75791 330 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 ERBB2P04626 1255 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 TCF4P15884 667 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 MRPL10Q7Z7H8 261 aaKnown RBP14.76□□□□□ -0.05
SMPD4-219ENST00000491128 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 EMC1Q8N766 993 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 CEP112Q8N8E3 955 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 AP1M1Q9BXS5 423 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 SYNCQ9H7C4 482 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 GIT1Q9Y2X7 761 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 TET1Q8NFU7 2136 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 EFCAB8A8MWE9 144 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 XPOTO43592 962 aaKnown RBP14.76□□□□□ -0.05
SMPD4-219ENST00000491128 SPOPO43791 374 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 PAEPP09466 180 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 SSR1P43307 286 aaKnown RBP14.76□□□□□ -0.05
SMPD4-219ENST00000491128 CLLU1OSQ5K130 101 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 KIAA0319Q5VV43 1072 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 TTC30AQ86WT1 665 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 PHF13Q86YI8 300 aaPredicted RBP14.76□□□□□ -0.05
SMPD4-219ENST00000491128 HACE1Q8IYU2 909 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 SENP8Q96LD8 212 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 SNX25Q9H3E2 840 aa14.76□□□□□ -0.05
SMPD4-219ENST00000491128 C9IYK1 514 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 DDX3YO15523 660 aaKnown RBP14.75□□□□□ -0.05
SMPD4-219ENST00000491128 STAU1O95793 577 aaKnown RBP14.75□□□□□ -0.05
SMPD4-219ENST00000491128 PFKMP08237 780 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 TCP1P17987 556 aaKnown RBP14.75□□□□□ -0.05
SMPD4-219ENST00000491128 GPD2P43304 727 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 FAAP100Q0VG06 881 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 TIGD5Q53EQ6 642 aa14.75□□□□□ -0.05
SMPD4-219ENST00000491128 SLC39A5Q6ZMH5 540 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms