RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RPP25Q9BUL9 199 aaKnown RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 ASAH2Q9NR71 780 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 SLC27A5Q9Y2P5 690 aa16.34■□□□□ 0.21
COL27A1-206ENST00000490831 R3HCC1Q9Y3T6 440 aaKnown RBP16.34■□□□□ 0.21
COL27A1-206ENST00000490831 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 TULP1O00294 542 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-206ENST00000490831 MAPK13O15264 365 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 CST3P01034 146 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-206ENST00000490831 HAPLN1P10915 354 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-206ENST00000490831 AP3M2P53677 418 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 TSPY1Q01534 308 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 NFE2Q16621 373 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-206ENST00000490831 INTS6LQ5JSJ4 861 aaKnown RBP16.33■□□□□ 0.2
COL27A1-206ENST00000490831 OSTM1Q86WC4 334 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 ADGRF2Q8IZF7 708 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 SPATA20Q8TB22 786 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 KBTBD7Q8WVZ9 684 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 TIGD1Q96MW7 591 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 ABCB6Q9NP58 842 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 TMLHEQ9NVH6 421 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 DDX43Q9NXZ2 648 aaKnown RBP16.33■□□□□ 0.2
COL27A1-206ENST00000490831 KMT2EQ8IZD2 1858 aa16.33■□□□□ 0.2
COL27A1-206ENST00000490831 LRRIQ3A6PVS8 624 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-206ENST00000490831 CALUO43852 315 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-206ENST00000490831 ECI2O75521 394 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 ATF6P18850 670 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 WARSP23381 471 aaKnown RBP16.32■□□□□ 0.2
COL27A1-206ENST00000490831 FCARP24071 287 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 PCSK1P29120 753 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 AVPR2P30518 371 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 CASP4P49662 377 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 MCCD1P59942 119 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-206ENST00000490831 MYL7Q01449 175 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 ZCWPW2Q504Y3 356 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 COBLL1Q53SF7 1204 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 DNAJB7Q7Z6W7 309 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-206ENST00000490831 ITIH5Q86UX2 942 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
COL27A1-206ENST00000490831 TMC2Q8TDI7 906 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 XYLT2Q9H1B5 865 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 VRTNQ9H8Y1 702 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 TRPV4Q9HBA0 871 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 PCDHB5Q9Y5E4 795 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 WDFY4Q6ZS81 3184 aa16.32■□□□□ 0.2
COL27A1-206ENST00000490831 TACC1O75410 805 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 SOAT2O75908 522 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 FGF19O95750 216 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 C4BPAP04003 597 aaKnown RBP16.31■□□□□ 0.2
COL27A1-206ENST00000490831 NPR3P17342 541 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 ATICP31939 592 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 CLCN5P51795 746 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 NUBP1P53384 320 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 VCPP55072 806 aaKnown RBP16.31■□□□□ 0.2
COL27A1-206ENST00000490831 ENPEPQ07075 957 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 PNOCQ13519 176 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 TDRD10Q5VZ19 366 aaKnown RBP16.31■□□□□ 0.2
COL27A1-206ENST00000490831 FAM171BQ6P995 826 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 SHKBP1Q8TBC3 707 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 ELSPBP1Q96BH3 223 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 ASB16Q96NS5 453 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 GSDMAQ96QA5 445 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 GPR88Q9GZN0 384 aa16.31■□□□□ 0.2
COL27A1-206ENST00000490831 ABI2Q9NYB9 513 aaPredicted RBP16.31■□□□□ 0.2
COL27A1-206ENST00000490831 KRBA1A5PL33 1030 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 IKBKBO14920 756 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 CFHP08603 1231 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 MYL4P12829 197 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 MYL6P60660 151 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 MGAT5BQ3V5L5 792 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 CFAP221Q4G0U5 840 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 FAM78AQ5JUQ0 283 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 CWF19L1Q69YN2 538 aaKnown RBP16.3■□□□□ 0.2
COL27A1-206ENST00000490831 ASTLQ6HA08 431 aaPredicted RBP16.3■□□□□ 0.2
COL27A1-206ENST00000490831 GAREM2Q75VX8 874 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 SIX5Q8N196 739 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 ST13P5Q8NFI4 369 aaPredicted RBP16.3■□□□□ 0.2
COL27A1-206ENST00000490831 GPR152Q8TDT2 470 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
COL27A1-206ENST00000490831 FUBP3Q96I24 572 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL27A1-206ENST00000490831 SEPT5Q99719 369 aaPredicted RBP16.3■□□□□ 0.2
COL27A1-206ENST00000490831 PRRX2Q99811 253 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 KXD1Q9BQD3 176 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 LPIN3Q9BQK8 851 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 ZNF334Q9HCZ1 680 aaPredicted RBP16.3■□□□□ 0.2
COL27A1-206ENST00000490831 RMND1Q9NWS8 449 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 FBXL21Q9UKT6 434 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 CDH9Q9ULB4 789 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 FRMD4BQ9Y2L6 1034 aa16.3■□□□□ 0.2
COL27A1-206ENST00000490831 HCRTO43612 131 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 AKAP3O75969 853 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 NR2F2P24468 414 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 ACAT1P24752 427 aaKnown RBP16.29■□□□□ 0.2
COL27A1-206ENST00000490831 LMO2P25791 158 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 GPC5P78333 572 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 DLG4P78352 724 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 TRPC3Q13507 836 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 VEPH1Q14D04 833 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 TEAD2Q15562 447 aa16.29■□□□□ 0.2
COL27A1-206ENST00000490831 EDRF1Q3B7T1 1238 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms