RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 IL31RAQ8NI17 732 aa6.58□□□□□ -1.36
CCDC39-206ENST00000489868 SNX19Q92543 992 aa6.58□□□□□ -1.36
CCDC39-206ENST00000489868 CAVIN3Q969G5 261 aa6.58□□□□□ -1.36
CCDC39-206ENST00000489868 TRIM54Q9BYV2 358 aa6.58□□□□□ -1.36
CCDC39-206ENST00000489868 C22orf23Q9BZE7 217 aa6.58□□□□□ -1.36
CCDC39-206ENST00000489868 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.58□□□□□ -1.36
CCDC39-206ENST00000489868 HESX1Q9UBX0 185 aa6.58□□□□□ -1.36
CCDC39-206ENST00000489868 L1RE1Q9UN81 338 aa6.58□□□□□ -1.36
CCDC39-206ENST00000489868 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 FAM227AF5H4B4 570 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 SRGNP10124 158 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 AVPR1BP47901 424 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 KCNJ5P48544 419 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 BLOC1S1P78537 153 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 MPP3Q13368 585 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 HLXQ14774 488 aaPredicted RBP6.57□□□□□ -1.36
CCDC39-206ENST00000489868 FAM160B1Q5W0V3 765 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 VWA1Q6PCB0 445 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 APOA5Q6Q788 366 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 MAEAQ7L5Y9 396 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 MYCBPAPQ8TBZ2 947 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 OBP2AQ9NY56 170 aa6.57□□□□□ -1.36
CCDC39-206ENST00000489868 USP19O94966 1318 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 CAPN8A6NHC0 703 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 VWC2LB2RUY7 222 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 MGST3O14880 152 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 PROM1O43490 865 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 GRPP07492 148 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 GCLCP48506 637 aaPredicted RBP6.56□□□□□ -1.36
CCDC39-206ENST00000489868 NDUFV1P49821 464 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 GPSM2P81274 684 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 GBX1Q14549 363 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 CNN3Q15417 329 aaKnown RBP6.56□□□□□ -1.36
CCDC39-206ENST00000489868 VPS53Q5VIR6 699 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 DDX17Q92841 729 aaKnown RBP6.56□□□□□ -1.36
CCDC39-206ENST00000489868 SLC46A1Q96NT5 459 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 TTYH3Q9C0H2 523 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 SIK2Q9H0K1 926 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 SYNPO2LQ9H987 977 aa6.56□□□□□ -1.36
CCDC39-206ENST00000489868 PIH1D1Q9NWS0 290 aaKnown RBP6.56□□□□□ -1.36
CCDC39-206ENST00000489868 SPATA31A3Q5VYP0 1347 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 A0A0B4J269 797 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 A0A1W2PPL8 197 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 MYO1FO00160 1098 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 TBX3O15119 743 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 YY2O15391 372 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 ATF3P18847 181 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 UCP3P55916 312 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 TUBB3Q13509 450 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 GFOD2Q3B7J2 385 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 RBM20Q5T481 1227 aaKnown RBP6.55□□□□□ -1.36
CCDC39-206ENST00000489868 KIAA0895LQ68EN5 471 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 OLFML1Q6UWY5 402 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 CHST15Q7LFX5 561 aaPredicted RBP6.55□□□□□ -1.36
CCDC39-206ENST00000489868 FAM156AQ8NDB6 213 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 MAML1Q92585 1016 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 ANKS1AQ92625 1134 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 TIFAQ96CG3 184 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 HEPHQ9BQS7 1158 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 SPATA5L1Q9BVQ7 753 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 PRDM13Q9H4Q3 707 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 FOXJ2Q9P0K8 574 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 CHPF2Q9P2E5 772 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 PLEKHM1Q9Y4G2 1056 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 RAD54BQ9Y620 910 aa6.55□□□□□ -1.36
CCDC39-206ENST00000489868 F5H697 171 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 TPP1O14773 563 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 PHGDHO43175 533 aaKnown RBP6.54□□□□□ -1.36
CCDC39-206ENST00000489868 RHOP08100 348 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 SLC11A2P49281 568 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 FAM109AQ8N4B1 249 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.54□□□□□ -1.36
CCDC39-206ENST00000489868 KBTBD7Q8WVZ9 684 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 DPH1Q9BZG8 443 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 BHMT2Q9H2M3 363 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 SMURF2Q9HAU4 748 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 STK32BQ9NY57 414 aa6.54□□□□□ -1.36
CCDC39-206ENST00000489868 FRMPD2Q68DX3 1309 aaPredicted RBP6.53□□□□□ -1.36
CCDC39-206ENST00000489868 GOLGA6CA6NDK9 693 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 GOLGA6BA6NDN3 693 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 LMNAP02545 664 aaKnown RBP6.53□□□□□ -1.36
CCDC39-206ENST00000489868 PDHA1P08559 390 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 GOLGA6DP0CG33 693 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 FOLR3P41439 243 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 CLK3P49761 638 aaKnown RBP6.53□□□□□ -1.36
CCDC39-206ENST00000489868 SIM1P81133 766 aaPredicted RBP6.53□□□□□ -1.36
CCDC39-206ENST00000489868 CTBP1Q13363 440 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 ZNF169Q14929 603 aaPredicted RBP6.53□□□□□ -1.36
CCDC39-206ENST00000489868 LONRF3Q496Y0 759 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 TMEM108Q6UXF1 575 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 TOR1AIP2Q8NFQ8 470 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 TFAP2BQ92481 460 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 OSBPL9Q96SU4 736 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 AMBRA1Q9C0C7 1298 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 CNNM1Q9NRU3 951 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 GOLGA6AQ9NYA3 693 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 XPR1Q9UBH6 696 aa6.53□□□□□ -1.36
CCDC39-206ENST00000489868 A0A087WWL8 130 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 WDR27A2RRH5 827 aa6.52□□□□□ -1.37
CCDC39-206ENST00000489868 CFAP69A5D8W1 941 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms