RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ZNF473Q8WTR7 871 aaKnown RBP15.82■□□□□ 0.12
COL9A1-208ENST00000489611 MIS12Q9H081 205 aa15.82■□□□□ 0.12
COL9A1-208ENST00000489611 CDT1Q9H211 546 aa15.82■□□□□ 0.12
COL9A1-208ENST00000489611 NEU2Q9Y3R4 380 aa15.82■□□□□ 0.12
COL9A1-208ENST00000489611 FAM169AQ9Y6X4 670 aa15.82■□□□□ 0.12
COL9A1-208ENST00000489611 RBM47A0AV96 593 aaKnown RBP15.81■□□□□ 0.12
COL9A1-208ENST00000489611 FAM155AB1AL88 458 aaPredicted RBP15.81■□□□□ 0.12
COL9A1-208ENST00000489611 ECM2O94769 699 aaPredicted RBP15.81■□□□□ 0.12
COL9A1-208ENST00000489611 TTC4O95801 387 aa15.81■□□□□ 0.12
COL9A1-208ENST00000489611 WEE2P0C1S8 567 aa15.81■□□□□ 0.12
COL9A1-208ENST00000489611 SSR1P43307 286 aaKnown RBP15.81■□□□□ 0.12
COL9A1-208ENST00000489611 TAS2R40P59535 323 aa15.81■□□□□ 0.12
COL9A1-208ENST00000489611 SNX1Q13596 522 aa15.81■□□□□ 0.12
COL9A1-208ENST00000489611 THNSL1Q8IYQ7 743 aa15.81■□□□□ 0.12
COL9A1-208ENST00000489611 CPA4Q9UI42 421 aa15.81■□□□□ 0.12
COL9A1-208ENST00000489611 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 MCM3APO60318 1980 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 SHBGP04278 402 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 KRT7P08729 469 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 CD58P19256 250 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 RDXP35241 583 aaKnown RBP15.8■□□□□ 0.12
COL9A1-208ENST00000489611 TFDP3Q5H9I0 405 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 ARMCX2Q7L311 632 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 APBB1IPQ7Z5R6 666 aaPredicted RBP15.8■□□□□ 0.12
COL9A1-208ENST00000489611 SLITRK1Q96PX8 696 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 ZIC5Q96T25 663 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 CCDC77Q9BR77 488 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 CDC42EP4Q9H3Q1 356 aaKnown RBP15.8■□□□□ 0.12
COL9A1-208ENST00000489611 KIAA1257Q9ULG3 409 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 SIGLEC16A6NMB1 481 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 TP73O15350 636 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 STAU1O95793 577 aaKnown RBP15.8■□□□□ 0.12
COL9A1-208ENST00000489611 BRD2P25440 801 aaKnown RBP15.8■□□□□ 0.12
COL9A1-208ENST00000489611 ITGA8P53708 1063 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 ARHGAP1Q07960 439 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 HADHQ16836 314 aaKnown RBP15.8■□□□□ 0.12
COL9A1-208ENST00000489611 C2CD6Q53TS8 623 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 ERMARDQ5T6L9 678 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 TTC13Q8NBP0 860 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 ATG4AQ8WYN0 398 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 P3H4Q92791 437 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 MCEEQ96PE7 176 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 CCDC134Q9H6E4 229 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 IFT122Q9HBG6 1241 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 PPANQ9NQ55 473 aaKnown RBP15.8■□□□□ 0.12
COL9A1-208ENST00000489611 USTQ9Y2C2 406 aa15.8■□□□□ 0.12
COL9A1-208ENST00000489611 C5orf60A6NFR6 353 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 KRT1P04264 644 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 LGALS2P05162 132 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 FGFR4P22455 802 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 ADORA2AP29274 412 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 RPL7AP62424 266 aaKnown RBP15.79■□□□□ 0.12
COL9A1-208ENST00000489611 CDC42EP1Q00587 391 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 ZNF268Q14587 947 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-208ENST00000489611 TAF1CQ15572 869 aaPredicted RBP15.79■□□□□ 0.12
COL9A1-208ENST00000489611 FAM110CQ1W6H9 321 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 GSTA5Q7RTV2 222 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 LINC01465Q8N7H1 131 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 HEMGNQ9BXL5 484 aa15.79■□□□□ 0.12
COL9A1-208ENST00000489611 TLDC2A0PJX2 215 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 TMEM88BA6NKF7 163 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 MEFVO15553 781 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 LIASO43766 372 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 INSRRP14616 1297 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 CLCN3P51790 818 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 ZNF792Q3KQV3 632 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 LLGL2Q6P1M3 1020 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 SPOCD1Q6ZMY3 1216 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 PHLDB2Q86SQ0 1253 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 CCDC25Q86WR0 208 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 IFNL1Q8IU54 200 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 RIBC1Q8N443 379 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 NKD2Q969F2 451 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 TTC25Q96NG3 672 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 PPCSQ9HAB8 311 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 ITGA11Q9UKX5 1188 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 R3HDM2Q9Y2K5 976 aaKnown RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 C2CD2Q9Y426 696 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 TOMM70O94826 608 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 HMGCRP04035 888 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 ITGAVP06756 1048 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 ABHD2P08910 425 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 STAG3L1P0CL83 205 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 CXCL8P10145 99 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 KRT3P12035 628 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 KLRC2P26717 231 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 AUHQ13825 339 aaKnown RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 PCBP1Q15365 356 aaKnown RBP eCLIP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 STILQ15468 1287 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 WDR72Q3MJ13 1102 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 ZFYVE27Q5T4F4 411 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 GKAP1Q5VSY0 366 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 PAXIP1Q6ZW49 1069 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 GPR142Q7Z601 462 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 ZCCHC9Q8N567 271 aaKnown RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 WDTC1Q8N5D0 677 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 RAPGEF5Q92565 580 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 CHMP6Q96FZ7 201 aa15.78■□□□□ 0.12
COL9A1-208ENST00000489611 XPO6Q96QU8 1125 aaKnown RBP15.78■□□□□ 0.12
COL9A1-208ENST00000489611 ADPGKQ9BRR6 497 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms