RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	PON2	Q15165	354 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	TAF12	Q16514	161 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	ARHGAP29	Q52LW3	1261 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	SCARA3	Q6AZY7	606 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	THEM5	Q8N1Q8	247 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	BPIFB1	Q8TDL5	484 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	SECISBP2L	Q93073	1101 aa	Known RBP	13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	DNAJC19	Q96DA6	116 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	GCNA	Q96QF7	691 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	FAM213A	Q9BRX8	229 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	IER2	Q9BTL4	223 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	FGFBP2	Q9BYJ0	223 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	TASP1	Q9H6P5	420 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	MRPL44	Q9H9J2	332 aa	Known RBP	13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	PARD6A	Q9NPB6	346 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	TMLHE	Q9NVH6	421 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	C2orf42	Q9NWW7	574 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	HSFX1	Q9UBD0	423 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	CCDC39	Q9UFE4	941 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	USP18	Q9UMW8	372 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	SDK1	Q7Z5N4	2213 aa		13.92	□□□□□ -0.18
WDR46-238	ENST00000488944	MYBPHL	A2RUH7	354 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	GOLGA8IP	A6NC78	632 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	GOLGA8J	A6NMD2	632 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	KPNA7	A9QM74	516 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	CHURC1-FNTB	B4DL54	471 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	GCNT3	O95395	438 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	FGF19	O95750	216 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	HAPLN1	P10915	354 aa	Predicted RBP	13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	CDC25C	P30307	473 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	POLR2B	P30876	1174 aa	Known RBP	13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	FNTB	P49356	437 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	GPR15	P49685	360 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	CASP5	P51878	434 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	NRL	P54845	237 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	MLLT6	P55198	1093 aa	Predicted RBP	13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	TFAM	Q00059	246 aa	Known RBP	13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	REST	Q13127	1097 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	SRSF5	Q13243	272 aa	Known RBP	13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	CUL4A	Q13619	759 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	LRRC32	Q14392	662 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	PPP2R5D	Q14738	602 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	SV2C	Q496J9	727 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	RRAGB	Q5VZM2	374 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	HEATR6	Q6AI08	1181 aa	Known RBP	13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	MAMSTR	Q6ZN01	415 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	PRR23B	Q6ZRT6	265 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	SPEM1	Q8N4L4	309 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	SPPL2B	Q8TCT7	592 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	NOC3L	Q8WTT2	800 aa	Known RBP	13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	HVCN1	Q96D96	273 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	MSANTD3	Q96H12	275 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	STRA6	Q9BX79	667 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	SLC46A2	Q9BY10	475 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	GMEB2	Q9UKD1	530 aa		13.91	□□□□□ -0.18
WDR46-238	ENST00000488944	IL18RAP	O95256	599 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	ITGB3	P05106	788 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	IDE	P14735	1019 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	TGM1	P22735	817 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	SPEM2	Q0P670	501 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	POSTN	Q15063	836 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	CCDC142	Q17RM4	750 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	L1TD1	Q5T7N2	865 aa	Known RBP	13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	SDHAF4	Q5VUM1	108 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	SV2B	Q7L1I2	683 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	TMEM150A	Q86TG1	271 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	RALGPS2	Q86X27	583 aa	Predicted RBP	13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	BRSK2	Q8IWQ3	736 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	ZNF560	Q96MR9	790 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	ACCS	Q96QU6	501 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	PI4K2A	Q9BTU6	479 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	PANK2	Q9BZ23	570 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	OBP2A	Q9NY56	170 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	SEL1L	Q9UBV2	794 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	RAB23	Q9ULC3	237 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	L1RE1	Q9UN81	338 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	AGAP1	Q9UPQ3	857 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	CCL26	Q9Y258	94 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	PCDHB5	Q9Y5E4	795 aa		13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	SRPRB	Q9Y5M8	271 aa	Known RBP	13.9	□□□□□ -0.18
WDR46-238	ENST00000488944	SPAG17	Q6Q759	2223 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944		A0A087X0B3	334 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944		K7ESF4	209 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	PRPF40A	O75400	957 aa	Known RBP	13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	HMGA1	P17096	107 aa	Known RBP	13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	GAP43	P17677	238 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	SYT1	P21579	422 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	ACAT1	P24752	427 aa	Known RBP	13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	TXLNA	P40222	546 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	NLRP12	P59046	1061 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	POU5F1	Q01860	360 aa	Known RBP	13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	BFSP1	Q12934	665 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	C1orf228	Q6PIY5	440 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	NT5DC4	Q86YG4	428 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	DCP1B	Q8IZD4	617 aa	Known RBP	13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	SYCP3	Q8IZU3	236 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	CMTM8	Q8IZV2	173 aa		13.89	□□□□□ -0.19
WDR46-238	ENST00000488944	PDCL2	Q8N4E4	241 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms