RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 NECTIN3Q9NQS3 549 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 GJB4Q9NTQ9 266 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 MRGBPQ9NV56 204 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 IRAK4Q9NWZ3 460 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 BTG4Q9NY30 223 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 CLDND1Q9NY35 253 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 STK32BQ9NY57 414 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 CFDP1Q9UEE9 299 aaPredicted RBP3.85□□□□□ -1.79
PRPF4-203ENST00000488937 ODF2LQ9ULJ1 636 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 SIT1Q9Y3P8 196 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 CEP83Q9Y592 693 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 PASKQ96RG2 1323 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 GPRASP1Q5JY77 1395 aa3.85□□□□□ -1.79
PRPF4-203ENST00000488937 A0A1W2PPL8 197 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 AQP12BA6NM10 295 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SMTNL1A8MU46 457 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 PI4K2BG5E9Z4 385 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SGTAO43765 313 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 PTP4A3O75365 173 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 RTN3O95197 1032 aaPredicted RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 C4BPAP04003 597 aaKnown RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 MTHFD1P11586 935 aaKnown RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 BRAFP15056 766 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 ZNF28P17035 718 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 MUTP22033 750 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SLC7A1P30825 629 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 PAPOLAP51003 745 aaKnown RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 ARFIP2P53365 341 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 EPHA5P54756 1037 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CASP6P55212 293 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 BPIFB3P59826 476 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CHRNDQ07001 517 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 PPP3CAQ08209 521 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 MGAT2Q10469 447 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CDC16Q13042 620 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SCARB2Q14108 478 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 DCTN1Q14203 1278 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 BECN1Q14457 450 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 KRT32Q14532 448 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 UBE3CQ15386 1083 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 RAB30Q15771 203 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CHRNA2Q15822 529 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 RILPL1Q5EBL4 403 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CFAP58Q5T655 872 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 MFSD4BQ5TF39 518 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 NUGGCQ68CJ6 796 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 IGFL4Q6B9Z1 124 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SLC30A6Q6NXT4 461 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 RPUSD3Q6P087 351 aaKnown RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 RTL10Q7L3V2 364 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 TTC7BQ86TV6 843 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 KBTBD2Q8IY47 623 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 NLGN4XQ8N0W4 816 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 TXLNBQ8N3L3 684 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CCDC191Q8NCU4 936 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 TTLL11Q8NHH1 800 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 UHMK1Q8TAS1 419 aaKnown RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 STYXQ8WUJ0 223 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 THAP4Q8WY91 577 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 FATE1Q969F0 183 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 ATP6V1E2Q96A05 226 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 FOXRED1Q96CU9 486 aaPredicted RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SLC35A4Q96G79 324 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SUCLG2Q96I99 432 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 HIC2Q96JB3 615 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 MRGPRX1Q96LB2 322 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SYT3Q9BQG1 590 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SLF1Q9BQI6 1058 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 ADPGKQ9BRR6 497 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 DDX23Q9BUQ8 820 aaKnown RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 DPH1Q9BZG8 443 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 POFUT1Q9H488 388 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 ARMT1Q9H993 441 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 DBNDD1Q9H9R9 158 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 SERHLQ9NQF3 203 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 IGSF9Q9P2J2 1179 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CPNE7Q9UBL6 633 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 STAP2Q9UGK3 403 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 PRSS50Q9UI38 385 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 WASF3Q9UPY6 502 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 MAN2B2Q9Y2E5 1009 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 COA3Q9Y2R0 106 aaPredicted RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CDY2AQ9Y6F7 541 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 ATP23Q9Y6H3 246 aa3.84□□□□□ -1.79
PRPF4-203ENST00000488937 RSF1Q96T23 1441 aaPredicted RBP3.84□□□□□ -1.79
PRPF4-203ENST00000488937 CHL1O00533 1208 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 HGSO14964 777 aaPredicted RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 PRPF6O94906 941 aaKnown RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 KITP10721 976 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 RARBP10826 455 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 COL6A2P12110 1019 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 TYRP14679 529 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 COPAP53621 1224 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 PNLIPRP1P54315 467 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 SUMO3P55854 103 aaPredicted RBP3.83□□□□□ -1.8
PRPF4-203ENST00000488937 UBE3AQ05086 875 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 ADAM9Q13443 819 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 CUL4AQ13619 759 aa3.83□□□□□ -1.8
PRPF4-203ENST00000488937 SPIDRQ14159 915 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms