RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 SCARA5Q6ZMJ2 495 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 CCDC149Q6ZUS6 474 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 KREMEN2Q8NCW0 462 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 OR10T2Q8NGX3 314 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 LMO3Q8TAP4 145 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 MRPL45Q9BRJ2 306 aaKnown RBP17.06■□□□□ 0.32
HDAC7-224ENST00000488927 INTS2Q9H0H0 1204 aaKnown RBP17.06■□□□□ 0.32
HDAC7-224ENST00000488927 HSD3B7Q9H2F3 369 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 TAB2Q9NYJ8 693 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 HSFX1Q9UBD0 423 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 FBXW11Q9UKB1 542 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 ATG2AQ2TAZ0 1938 aa17.06■□□□□ 0.32
HDAC7-224ENST00000488927 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-224ENST00000488927 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 A8MXQ7 604 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 GLP2RO95838 553 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 EPCAMP16422 314 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 COPB1P53618 953 aaKnown RBP17.05■□□□□ 0.32
HDAC7-224ENST00000488927 GCNT1Q02742 428 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 INCA1Q0VD86 236 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 CUL2Q13617 745 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 SMYD5Q6GMV2 418 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 EP400NLQ6ZTU2 488 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 ENOSF1Q7L5Y1 443 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 LUZP1Q86V48 1076 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 OSTM1Q86WC4 334 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 JAKMIP2Q96AA8 810 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 TNIP3Q96KP6 325 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 SYT15Q9BQS2 421 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 UBE2ZQ9H832 354 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-224ENST00000488927 SFXN1Q9H9B4 322 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.05■□□□□ 0.322e-6■■■■■ 96.1
HDAC7-224ENST00000488927 MAN1C1Q9NR34 630 aa17.05■□□□□ 0.32
HDAC7-224ENST00000488927 BARX2Q9UMQ3 279 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-224ENST00000488927 LINC01565O15544 149 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 LRRN2O75325 713 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 WEE2P0C1S8 567 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 RAP1GAPP47736 663 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 CDH8P55286 799 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 ADCY1Q08828 1119 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 SLC39A12Q504Y0 691 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 ANKRD54Q6NXT1 300 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 TRIM65Q6PJ69 517 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 C4orf50Q6ZRC1 276 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 TCEAL8Q8IYN2 117 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 PPM1KQ8N3J5 372 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 VN1R2Q8NFZ6 395 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 TATDN2Q93075 761 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 VPS16Q9H269 839 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 ZDHHC7Q9NXF8 308 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 TSC2P49815 1807 aa17.04■□□□□ 0.32
HDAC7-224ENST00000488927 LGALS16A8MUM7 142 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 PRRG1O14668 218 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 TBX10O75333 385 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 PDGFRBP09619 1106 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 HNRNPA1P09651 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
HDAC7-224ENST00000488927 OR4Q2P0C623 313 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 ACAT1P24752 427 aaKnown RBP17.03■□□□□ 0.32
HDAC7-224ENST00000488927 LMO2P25791 158 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 HOXA9P31269 272 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 LRMPQ12912 555 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 FILIP1LQ4L180 1135 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 FAM171BQ6P995 826 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 CYP26C1Q6V0L0 522 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 RNF19BQ6ZMZ0 732 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 CMASQ8NFW8 434 aaPredicted RBP17.03■□□□□ 0.32
HDAC7-224ENST00000488927 ELMO3Q96BJ8 720 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 FUBP3Q96I24 572 aaKnown RBP eCLIP17.03■□□□□ 0.32
HDAC7-224ENST00000488927 TMEM209Q96SK2 561 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 CRACR2AQ9BSW2 395 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 NT5C1AQ9BXI3 368 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 SDCBP2Q9H190 292 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 CYP4F11Q9HBI6 524 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 ABCB6Q9NP58 842 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 CISHQ9NSE2 258 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 CLEC1BQ9P126 229 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 APEX2Q9UBZ4 518 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 PCDHB5Q9Y5E4 795 aa17.03■□□□□ 0.32
HDAC7-224ENST00000488927 MTMR11A4FU01 709 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 CILPO75339 1184 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 ZMYND10O75800 440 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 C8AP07357 584 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 SPATA31D3P0C874 917 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 ATP1A3P13637 1013 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 PTPN1P18031 435 aaKnown RBP17.02■□□□□ 0.32
HDAC7-224ENST00000488927 CD58P19256 250 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 SLC9A1P19634 815 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 RFX1P22670 979 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 PON1P27169 355 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 LTBRP36941 435 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 TUFMP49411 452 aaKnown RBP17.02■□□□□ 0.32
HDAC7-224ENST00000488927 NDST1P52848 882 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 MFAP3P55082 362 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 ITIH3Q06033 890 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 PLD1Q13393 1074 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 AAK1Q2M2I8 961 aa17.02■□□□□ 0.32
HDAC7-224ENST00000488927 PUS10Q3MIT2 529 aaKnown RBP17.02■□□□□ 0.32
HDAC7-224ENST00000488927 PPM1LQ5SGD2 360 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms