RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 LRRTM3Q86VH5 581 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 DCP1BQ8IZD4 617 aaKnown RBP19.72■□□□□ 0.75
ATG9A-222ENST00000488833 C1orf127Q8N9H9 656 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 LINC00301Q8NCQ3 95 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 SPPL2BQ8TCT7 592 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 GIPC2Q8TF65 315 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 CACTINQ8WUQ7 758 aaKnown RBP19.72■□□□□ 0.75
ATG9A-222ENST00000488833 FAM84AQ96KN4 292 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 PCIF1Q9H4Z3 704 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 PRMT8Q9NR22 394 aaPredicted RBP19.72■□□□□ 0.75
ATG9A-222ENST00000488833 PCDHGA2Q9Y5H1 932 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 CEP250Q9BV73 2442 aa19.72■□□□□ 0.75
ATG9A-222ENST00000488833 SPTLC2O15270 562 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 CHADO15335 359 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 EXTL3O43909 919 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 HAPLN1P10915 354 aaPredicted RBP19.71■□□□□ 0.75
ATG9A-222ENST00000488833 CCNE1P24864 410 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 CDC25CP30307 473 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 TSPY1Q01534 308 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 FCHO2Q0JRZ9 810 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 MTAPQ13126 283 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 TSSK4Q6SA08 328 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 ZNF687Q8N1G0 1237 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 ATRIPQ8WXE1 791 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 ZNF396Q96N95 335 aaPredicted RBP19.71■□□□□ 0.75
ATG9A-222ENST00000488833 CHRDQ9H2X0 955 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 TMEM206Q9H813 350 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 PCDHB5Q9Y5E4 795 aa19.71■□□□□ 0.75
ATG9A-222ENST00000488833 SLC38A8A6NNN8 435 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 PRAMEF12O95522 483 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 KRT19P08727 400 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 TMEM191BP0C7N4 346 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 KPNA1P52294 538 aaPredicted RBP19.7■□□□□ 0.74
ATG9A-222ENST00000488833 STXBP4Q6ZWJ1 553 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 PDCL2Q8N4E4 241 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 LRRC52Q8N7C0 313 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 RUBCNQ92622 972 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 MTMR12Q9C0I1 747 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 TNMDQ9H2S6 317 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 TASP1Q9H6P5 420 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 IL21Q9HBE4 155 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 PDE11AQ9HCR9 933 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 TMLHEQ9NVH6 421 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 ZSCAN32Q9NX65 697 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 TFIP11Q9UBB9 837 aaKnown RBP19.7■□□□□ 0.74
ATG9A-222ENST00000488833 ITGA11Q9UKX5 1188 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 L1RE1Q9UN81 338 aa19.7■□□□□ 0.74
ATG9A-222ENST00000488833 HUS1O60921 280 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 ID4P47928 161 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 SOX9P48436 509 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 ARHGAP29Q52LW3 1261 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 FOXD4L5Q5VV16 416 aaPredicted RBP19.69■□□□□ 0.74
ATG9A-222ENST00000488833 LMBRD2Q68DH5 695 aaPredicted RBP19.69■□□□□ 0.74
ATG9A-222ENST00000488833 KIAA2013Q8IYS2 634 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 GPD1LQ8N335 351 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 CSGALNACT2Q8N6G5 542 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 SUMF1Q8NBK3 374 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 GLIS3Q8NEA6 775 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 FOXD4L4Q8WXT5 416 aaPredicted RBP19.69■□□□□ 0.74
ATG9A-222ENST00000488833 HPS3Q969F9 1004 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 MSANTD3Q96H12 275 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 ZFYVE19Q96K21 471 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 IER2Q9BTL4 223 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 LRRC27Q9C0I9 530 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 LMAN1LQ9HAT1 526 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 OBP2AQ9NY56 170 aa19.69■□□□□ 0.74
ATG9A-222ENST00000488833 PPP6R2O75170 966 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 ASIC1P78348 528 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 E2F4Q16254 413 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 NFE2Q16621 373 aaPredicted RBP19.68■□□□□ 0.74
ATG9A-222ENST00000488833 ZBTB44Q8NCP5 570 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 TTC8Q8TAM2 541 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 DHX58Q96C10 678 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 ANKRD36BP1Q96IX9 119 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 LRRC3BQ96PB8 259 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 PI4K2AQ9BTU6 479 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 TRIM9Q9C026 710 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 CUEDC2Q9H467 287 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 C8orf33Q9H7E9 229 aaPredicted RBP19.68■□□□□ 0.74
ATG9A-222ENST00000488833 DDX43Q9NXZ2 648 aaKnown RBP19.68■□□□□ 0.74
ATG9A-222ENST00000488833 DENND4CQ5VZ89 1909 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 CACNA1AO00555 2505 aa19.68■□□□□ 0.74
ATG9A-222ENST00000488833 ZNF638Q14966 1978 aaKnown RBP19.67■□□□□ 0.74
ATG9A-222ENST00000488833 KIAA0391O15091 583 aaKnown RBP19.67■□□□□ 0.74
ATG9A-222ENST00000488833 PRPF40AO75400 957 aaKnown RBP19.67■□□□□ 0.74
ATG9A-222ENST00000488833 YEATS4O95619 227 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 ACAT1P24752 427 aaKnown RBP19.67■□□□□ 0.74
ATG9A-222ENST00000488833 WEE1P30291 646 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 GPR15P49685 360 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 MLLT6P55198 1093 aaPredicted RBP19.67■□□□□ 0.74
ATG9A-222ENST00000488833 RBP5P82980 135 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 MYL7Q01449 175 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 SCARA3Q6AZY7 606 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 C1orf228Q6PIY5 440 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 ADGRF2Q8IZF7 708 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 TMEM86AQ8N2M4 240 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 DCLK2Q8N568 766 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 STKLD1Q8NE28 680 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 CXorf38Q8TB03 319 aa19.67■□□□□ 0.74
ATG9A-222ENST00000488833 BPIFB1Q8TDL5 484 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms