RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 DCAF17Q5H9S7 520 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-217ENST00000488801 ZNF667Q5HYK9 610 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 INTS6LQ5JSJ4 861 aaKnown RBP19.98■□□□□ 0.79
PTCD3-217ENST00000488801 LIN9Q5TKA1 542 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 TMC5Q6UXY8 1006 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 CCDC149Q6ZUS6 474 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 THEM5Q8N1Q8 247 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 FBXL13Q8NEE6 735 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 SEMA4DQ92854 862 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 NECTIN4Q96NY8 510 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 MRPL45Q9BRJ2 306 aaKnown RBP19.98■□□□□ 0.79
PTCD3-217ENST00000488801 APOL5Q9BWW9 433 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 BCO2Q9BYV7 579 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 SMYD3Q9H7B4 428 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 DDX43Q9NXZ2 648 aaKnown RBP19.98■□□□□ 0.79
PTCD3-217ENST00000488801 PRKAG3Q9UGI9 489 aa19.98■□□□□ 0.79
PTCD3-217ENST00000488801 CCDC195A0A1B0GUA6 201 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 FGFR1OPO95684 399 aaKnown RBP19.97■□□□□ 0.79
PTCD3-217ENST00000488801 PTMSP20962 102 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 MTHFRP42898 656 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 FMO5P49326 533 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 ARPP19P56211 112 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 TNNC1P63316 161 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 MYL7Q01449 175 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 ADCY1Q08828 1119 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 SMARCB1Q12824 385 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 CCDC40Q4G0X9 1142 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 TCERG1LQ5VWI1 586 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 SPOPLQ6IQ16 392 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 CES5AQ6NT32 575 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 ELMO3Q96BJ8 720 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 FAXDC2Q96IV6 333 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 SDCBP2Q9H190 292 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 POMKQ9H5K3 350 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 MMRN2Q9H8L6 949 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 TMLHEQ9NVH6 421 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 INSL5Q9Y5Q6 135 aa19.97■□□□□ 0.79
PTCD3-217ENST00000488801 C19orf67A6NJJ6 358 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 LMO2P25791 158 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 PCSK1P29120 753 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 ZP2Q05996 745 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 STX1AQ16623 288 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 PPM1LQ5SGD2 360 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 CAVIN1Q6NZI2 390 aaKnown RBP19.96■□□□□ 0.79
PTCD3-217ENST00000488801 FAM171BQ6P995 826 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 C11orf57Q6ZUT1 292 aaPredicted RBP19.96■□□□□ 0.79
PTCD3-217ENST00000488801 C2orf15Q8WU43 125 aaKnown RBP19.96■□□□□ 0.79
PTCD3-217ENST00000488801 CNOT6LQ96LI5 555 aaKnown RBP19.96■□□□□ 0.79
PTCD3-217ENST00000488801 RIPOR3Q96MK2 946 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 PI4K2AQ9BTU6 479 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 THAP9Q9H5L6 903 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 NXF1Q9UBU9 619 aaKnown RBP19.96■□□□□ 0.79
PTCD3-217ENST00000488801 YIPF1Q9Y548 306 aa19.96■□□□□ 0.79
PTCD3-217ENST00000488801 P4HA2O15460 535 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 WEE2P0C1S8 567 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 CCDC192P0DO97 292 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 ACAT1P24752 427 aaKnown RBP19.95■□□□□ 0.78
PTCD3-217ENST00000488801 TSPY1Q01534 308 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 INCA1Q0VD86 236 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 CCDC142Q17RM4 750 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 SLC39A12Q504Y0 691 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 ADHFE1Q8IWW8 467 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 TTC9BQ8N6N2 239 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 LMO3Q8TAP4 145 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 SPPL2BQ8TCT7 592 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 ADAMTS19Q8TE59 1207 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 SMG7Q92540 1137 aaKnown RBP19.95■□□□□ 0.78
PTCD3-217ENST00000488801 PGLYRP2Q96PD5 576 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 MMS19Q96T76 1030 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 SYT15Q9BQS2 421 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 FUCA2Q9BTY2 467 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 PHF7Q9BWX1 381 aaPredicted RBP19.95■□□□□ 0.78
PTCD3-217ENST00000488801 NIF3L1Q9GZT8 377 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 CYP4F11Q9HBI6 524 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 CRTAC1Q9NQ79 661 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 ANO10Q9NW15 660 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 RAB20Q9NX57 234 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 CDH9Q9ULB4 789 aa19.95■□□□□ 0.78
PTCD3-217ENST00000488801 N4BP1O75113 896 aaKnown RBP19.94■□□□□ 0.78
PTCD3-217ENST00000488801 RAP1GAPP47736 663 aa19.94■□□□□ 0.78
PTCD3-217ENST00000488801 ATAT1Q5SQI0 421 aa19.94■□□□□ 0.78
PTCD3-217ENST00000488801 DCP1BQ8IZD4 617 aaKnown RBP19.94■□□□□ 0.78
PTCD3-217ENST00000488801 ATAD1Q8NBU5 361 aa19.94■□□□□ 0.78
PTCD3-217ENST00000488801 ENOX1Q8TC92 643 aaKnown RBP19.94■□□□□ 0.78
PTCD3-217ENST00000488801 IMPG2Q9BZV3 1241 aa19.94■□□□□ 0.78
PTCD3-217ENST00000488801 DNAJC25Q9H1X3 360 aa19.94■□□□□ 0.78
PTCD3-217ENST00000488801 FAM124BQ9H5Z6 455 aaPredicted RBP19.94■□□□□ 0.78
PTCD3-217ENST00000488801 WDR6Q9NNW5 1121 aaKnown RBP19.94■□□□□ 0.78
PTCD3-217ENST00000488801 ABCB6Q9NP58 842 aa19.94■□□□□ 0.78
PTCD3-217ENST00000488801 CLUHO75153 1309 aa19.94■□□□□ 0.78
PTCD3-217ENST00000488801 MYBPHLA2RUH7 354 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 LOC730098B7Z3J9 87 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 P4HA1P13674 534 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 CDH8P55286 799 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 TYRO3Q06418 890 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 KCNH2Q12809 1159 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 DUSP4Q13115 394 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 NFE2Q16621 373 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-217ENST00000488801 CFAP221Q4G0U5 840 aa19.93■□□□□ 0.78
PTCD3-217ENST00000488801 SASS6Q6UVJ0 657 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms