RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 NELFBQ8WX92 580 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 ZNF516Q92618 1163 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 CEP63Q96MT8 703 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 SEPT5Q99719 369 aaPredicted RBP13.81□□□□□ -0.2
PHF1-210ENST00000488767 CORO1BQ9BR76 489 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 MMRN2Q9H8L6 949 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 METTL14Q9HCE5 456 aaKnown RBP13.81□□□□□ -0.2
PHF1-210ENST00000488767 ASAH2Q9NR71 780 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 ABI2Q9NYB9 513 aaPredicted RBP13.81□□□□□ -0.2
PHF1-210ENST00000488767 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
PHF1-210ENST00000488767 DACH1Q9UI36 760 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 YIPF1Q9Y548 306 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 ASB3Q9Y575 518 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 PCDHB5Q9Y5E4 795 aa13.81□□□□□ -0.2
PHF1-210ENST00000488767 C2CD4DB7Z1M9 353 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 TACC1O75410 805 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 SEC24AO95486 1093 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 FGF19O95750 216 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 GNA14O95837 355 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 C4BPAP04003 597 aaKnown RBP13.8□□□□□ -0.2
PHF1-210ENST00000488767 TRIM49P0CI25 452 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 TRIM49CP0CI26 452 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 WARSP23381 471 aaKnown RBP13.8□□□□□ -0.2
PHF1-210ENST00000488767 GNL1P36915 607 aaPredicted RBP13.8□□□□□ -0.2
PHF1-210ENST00000488767 GCLMP48507 274 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 DLG4P78352 724 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 CCDC40Q4G0X9 1142 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 INTS6LQ5JSJ4 861 aaKnown RBP13.8□□□□□ -0.2
PHF1-210ENST00000488767 KRT39Q6A163 491 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 C4orf50Q6ZRC1 276 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 SV2AQ7L0J3 742 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 ZC3H3Q8IXZ2 948 aaKnown RBP13.8□□□□□ -0.2
PHF1-210ENST00000488767 ATAD1Q8NBU5 361 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 OR6B3Q8NGW1 331 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 PLEKHO2Q8TD55 490 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 EEF2KMTQ96G04 330 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 C1QTNF1Q9BXJ1 281 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 VRTNQ9H8Y1 702 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 CD320Q9NPF0 282 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 CDH9Q9ULB4 789 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 CTNND2Q9UQB3 1225 aa13.8□□□□□ -0.2
PHF1-210ENST00000488767 MRPS23Q9Y3D9 190 aaKnown RBP13.8□□□□□ -0.2
PHF1-210ENST00000488767 TRIM49BA6NDI0 452 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 A8MXQ7 604 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 MBD3O95983 291 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 RHOP08100 348 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 ACAT1P24752 427 aaKnown RBP13.79□□□□□ -0.2
PHF1-210ENST00000488767 MXI1P50539 228 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 CETN1Q12798 172 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 MTMR3Q13615 1198 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
PHF1-210ENST00000488767 MLKLQ8NB16 471 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 NXPE3Q969Y0 559 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 GCNAQ96QF7 691 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 TMEM209Q96SK2 561 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 RTP3Q9BQQ7 232 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 SYT15Q9BQS2 421 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 GZF1Q9H116 711 aaPredicted RBP13.79□□□□□ -0.2
PHF1-210ENST00000488767 ABCB6Q9NP58 842 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 CDH7Q9ULB5 785 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 SLC27A5Q9Y2P5 690 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 MTCL1Q9Y4B5 1905 aaKnown RBP13.79□□□□□ -0.2
PHF1-210ENST00000488767 SCN1AP35498 2009 aa13.79□□□□□ -0.2
PHF1-210ENST00000488767 PPP1R3GB7ZBB8 358 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 GABRDO14764 452 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 HLA-DRAP01903 254 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 PDGFRBP09619 1106 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 BMP6P22004 513 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 RPL10AP62906 217 aaKnown RBP13.78□□□□□ -0.2
PHF1-210ENST00000488767 PTPN21Q16825 1174 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 TPD52L1Q16890 204 aaPredicted RBP13.78□□□□□ -0.2
PHF1-210ENST00000488767 WDR44Q5JSH3 913 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 SCARA5Q6ZMJ2 495 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 MTSS1LQ765P7 747 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 FRMD5Q7Z6J6 570 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 FILIP1Q7Z7B0 1213 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 FUBP3Q96I24 572 aaKnown RBP eCLIP13.78□□□□□ -0.2
PHF1-210ENST00000488767 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 AVENQ9NQS1 362 aaPredicted RBP13.78□□□□□ -0.2
PHF1-210ENST00000488767 HCFC1R1Q9NWW0 138 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 IGSF9Q9P2J2 1179 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 DNMT3BQ9UBC3 853 aaKnown RBP13.78□□□□□ -0.2
PHF1-210ENST00000488767 LIMD1Q9UGP4 676 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 MUTYHQ9UIF7 546 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 SORCS3Q9UPU3 1222 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 ATP8B3O60423 1300 aa13.78□□□□□ -0.2
PHF1-210ENST00000488767 N4BP1O75113 896 aaKnown RBP13.77□□□□□ -0.21
PHF1-210ENST00000488767 MICAL2O94851 1124 aa13.77□□□□□ -0.21
PHF1-210ENST00000488767 VNN1O95497 513 aa13.77□□□□□ -0.21
PHF1-210ENST00000488767 ASS1P00966 412 aaKnown RBP13.77□□□□□ -0.21
PHF1-210ENST00000488767 CCDC192P0DO97 292 aa13.77□□□□□ -0.21
PHF1-210ENST00000488767 HAPLN1P10915 354 aaPredicted RBP13.77□□□□□ -0.21
PHF1-210ENST00000488767 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
PHF1-210ENST00000488767 TSC2P49815 1807 aa13.77□□□□□ -0.21
PHF1-210ENST00000488767 PMS1P54277 932 aaKnown RBP13.77□□□□□ -0.21
PHF1-210ENST00000488767 NTHL1P78549 312 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms