RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, humanhuman

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-215ENST00000488452 PYM1Q9BRP8 204 aaKnown RBP16.4■□□□□ 0.22
NELFA-215ENST00000488452 SLC46A2Q9BY10 475 aa16.4■□□□□ 0.22
NELFA-215ENST00000488452 ST6GALNAC4Q9H4F1 302 aa16.4■□□□□ 0.22
NELFA-215ENST00000488452 SEMA4GQ9NTN9 838 aa16.4■□□□□ 0.22
NELFA-215ENST00000488452 ZMYM5Q9UJ78 669 aa16.4■□□□□ 0.22
NELFA-215ENST00000488452 AGO2Q9UKV8 859 aaKnown RBP16.4■□□□□ 0.22
NELFA-215ENST00000488452 STYXL1Q9Y6J8 313 aa16.4■□□□□ 0.22
NELFA-215ENST00000488452 TISP43B9A030 160 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 PRAMEF12O95522 483 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 HAPLN1P10915 354 aaPredicted RBP16.39■□□□□ 0.21
NELFA-215ENST00000488452 HOXA6P31267 233 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 CDR1P51861 262 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 GRIN1Q05586 938 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 SRSF5Q13243 272 aaKnown RBP16.39■□□□□ 0.21
NELFA-215ENST00000488452 CCINQ13939 588 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 PTPAQ15257 358 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 CSRP2Q16527 193 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 ITPRIPL2Q3MIP1 535 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 LARP1BQ659C4 914 aaKnown RBP16.39■□□□□ 0.21
NELFA-215ENST00000488452 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.39■□□□□ 0.21
NELFA-215ENST00000488452 DCP1BQ8IZD4 617 aaKnown RBP16.39■□□□□ 0.21
NELFA-215ENST00000488452 CNTNAP3BQ96NU0 1288 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 CNTNAP3Q9BZ76 1288 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 CCSER1Q9C0I3 900 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 C2orf42Q9NWW7 574 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 SMC3Q9UQE7 1217 aa16.39■□□□□ 0.21
NELFA-215ENST00000488452 NUP210Q8TEM1 1887 aaPredicted RBP16.38■□□□□ 0.21
NELFA-215ENST00000488452 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.38■□□□□ 0.21
NELFA-215ENST00000488452 SLC30A4O14863 429 aa16.38■□□□□ 0.21
NELFA-215ENST00000488452 MCM2P49736 904 aa16.38■□□□□ 0.21
NELFA-215ENST00000488452 WSCD1Q658N2 575 aa16.38■□□□□ 0.21
NELFA-215ENST00000488452 CEP68Q76N32 757 aa16.38■□□□□ 0.21
NELFA-215ENST00000488452 ZNF720Q7Z2F6 126 aa16.38■□□□□ 0.21
NELFA-215ENST00000488452 WDR5BQ86VZ2 330 aa16.38■□□□□ 0.21
NELFA-215ENST00000488452 CMTM8Q8IZV2 173 aa16.38■□□□□ 0.21
NELFA-215ENST00000488452 KRI1Q8N9T8 703 aaKnown RBP16.38■□□□□ 0.21
NELFA-215ENST00000488452 SMG9Q9H0W8 520 aaKnown RBP16.38■□□□□ 0.21
NELFA-215ENST00000488452 GKN1Q9NS71 199 aa16.38■□□□□ 0.21
NELFA-215ENST00000488452 NCOR2Q9Y618 2525 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 KPNA7A9QM74 516 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 FOXD2O60548 495 aaPredicted RBP16.37■□□□□ 0.21
NELFA-215ENST00000488452 F11P03951 625 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 DDX6P26196 483 aaKnown RBP eCLIP16.37■□□□□ 0.21
NELFA-215ENST00000488452 POSTNQ15063 836 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 SV2CQ496J9 727 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 CRELD2Q6UXH1 353 aaPredicted RBP16.37■□□□□ 0.21
NELFA-215ENST00000488452 PRR23CQ6ZRP0 262 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 BRAPQ7Z569 592 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 NT5DC4Q86YG4 428 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 FAM160A2Q8N612 972 aaPredicted RBP16.37■□□□□ 0.21
NELFA-215ENST00000488452 POMGNT1Q8WZA1 660 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 FAM83CQ9BQN1 747 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 ABI2Q9NYB9 513 aaPredicted RBP16.37■□□□□ 0.21
NELFA-215ENST00000488452 PCDHB5Q9Y5E4 795 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 ANK1P16157 1881 aa16.37■□□□□ 0.21
NELFA-215ENST00000488452 SCN1AP35498 2009 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 TSC2P49815 1807 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 SOBPA7XYQ1 873 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 IL18RAPO95256 599 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 CD2BP2O95400 341 aaKnown RBP16.36■□□□□ 0.21
NELFA-215ENST00000488452 HMGA1P17096 107 aaKnown RBP16.36■□□□□ 0.21
NELFA-215ENST00000488452 AVPR1AP37288 418 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 NLRP12P59046 1061 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 RUNX3Q13761 415 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 SF3A1Q15459 793 aaKnown RBP16.36■□□□□ 0.21
NELFA-215ENST00000488452 TMEM150AQ86TG1 271 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 EFCAB13Q8IY85 973 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 MAB21L3Q8N8X9 362 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 HVCN1Q96D96 273 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 ZNF560Q96MR9 790 aa16.36■□□□□ 0.21
NELFA-215ENST00000488452 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
NELFA-215ENST00000488452 EXTL3O43909 919 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 ATG13O75143 517 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 ADRB1P08588 477 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 ADSSP30520 456 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 HOXC13P31276 330 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 PNPLA4P41247 253 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 AMPD2Q01433 879 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 TSPY1Q01534 308 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 GRSF1Q12849 480 aaKnown RBP eCLIP16.35■□□□□ 0.21
NELFA-215ENST00000488452 NFE2Q16621 373 aaPredicted RBP16.35■□□□□ 0.21
NELFA-215ENST00000488452 TMEM196Q5HYL7 178 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 DYMQ7RTS9 669 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 SFR1Q86XK3 245 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 USP13Q92995 863 aaPredicted RBP16.35■□□□□ 0.21
NELFA-215ENST00000488452 EPSTI1Q96J88 318 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 PI4K2AQ9BTU6 479 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 STRA6Q9BX79 667 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 IKZF4Q9H2S9 585 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 HPS4Q9NQG7 708 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 TDP1Q9NUW8 608 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 CCL26Q9Y258 94 aa16.35■□□□□ 0.21
NELFA-215ENST00000488452 CCDC163A0A0D9SF12 145 aa16.34■□□□□ 0.21
NELFA-215ENST00000488452 TRDMT1O14717 391 aaKnown RBP16.34■□□□□ 0.21
NELFA-215ENST00000488452 PRPF40AO75400 957 aaKnown RBP16.34■□□□□ 0.21
NELFA-215ENST00000488452 PPP1R37O75864 691 aa16.34■□□□□ 0.21
NELFA-215ENST00000488452 CSH1P0DML2 217 aa16.34■□□□□ 0.21
NELFA-215ENST00000488452 CSH2P0DML3 217 aa16.34■□□□□ 0.21
NELFA-215ENST00000488452 BFSP1Q12934 665 aa16.34■□□□□ 0.21
NELFA-215ENST00000488452 PPM1JQ5JR12 505 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms