RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 MMP1P03956 469 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 HOXC13P31276 330 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 UBXN1Q04323 297 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 FOLH1Q04609 750 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 DLG1Q12959 904 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SNAPC2Q13487 334 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 PDK3Q15120 406 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 MAPRE2Q15555 327 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 HLFQ16534 295 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 SFT2D3Q587I9 215 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 IGSF11Q5DX21 431 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 AGAP7PQ5VUJ5 663 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 FAM122CQ6P4D5 195 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 RGS9BPQ6ZS82 235 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 RAPH1Q70E73 1250 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 ARPINQ7Z6K5 226 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 RPGRQ92834 1020 aaKnown RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 RMDN1Q96DB5 314 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 BTBD9Q96Q07 612 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 HERC2P3Q9BVR0 1158 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 CSRNP2Q9H175 543 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 RNF39Q9H2S5 420 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 FOXP1Q9H334 677 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 ZSWIM5Q9P217 1185 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 GRID1Q9ULK0 1009 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 FAF1Q9UNN5 650 aaPredicted RBP6.67□□□□□ -1.34
SIK3-212ENST00000488337 ERGIC3Q9Y282 383 aa6.67□□□□□ -1.34
SIK3-212ENST00000488337 C1orf167Q5SNV9 1468 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ATAD5Q96QE3 1844 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 FAM196BA6NMK8 535 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 C2orf81A6NN90 581 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 C19orf81C9J6K1 198 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 H3BSA7 217 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ZNF701M0R085 212 aaPredicted RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 DKC1O60832 514 aaKnown RBP eCLIP6.66□□□□□ -1.34
SIK3-212ENST00000488337 JRKO75564 520 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ZBTB11O95625 1053 aaPredicted RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 S100BP04271 92 aaPredicted RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 GABRB3P28472 473 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 HCAR3P49019 387 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 RASSF2P50749 326 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 IST1P53990 364 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 CCDC6Q16204 474 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 METTL2BQ6P1Q9 378 aaKnown RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 FAM83AQ86UY5 434 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 TBC1D10CQ8IV04 446 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 SMYD4Q8IYR2 804 aaPredicted RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 DTX3Q8N9I9 347 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 SCFD1Q8WVM8 642 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 REXO5Q96IC2 774 aaKnown RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 SAMD11Q96NU1 681 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 FERD3LQ96RJ6 166 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 MARCH7Q9H992 704 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 MLXIPQ9HAP2 919 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 S100A14Q9HCY8 104 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 TBC1D23Q9NUY8 699 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 LRP2BPQ9P2M1 347 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ANKMY1Q9P2S6 941 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 DNM3Q9UQ16 869 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 SRPRBQ9Y5M8 271 aaKnown RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 NWD2Q9ULI1 1742 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 MRC1P22897 1456 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 IQANK1A0A1B0GTG1 560 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 SMIM23A6NLE4 172 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 MIF4GDA9UHW6 222 aaKnown RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 BET1O15155 118 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 SIN3BO75182 1162 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 CLPTM1O96005 669 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 UQCRFS1P1P0C7P4 283 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 THRAP10827 490 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ADD2P35612 726 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 PAFAH1B1P43034 410 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 COPB1P53618 953 aaKnown RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 KRT76Q01546 638 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 KCNMA1Q12791 1236 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ASPHQ12797 758 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 CYP2A13Q16696 494 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 MRPL10Q7Z7H8 261 aaKnown RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 IFNL1Q8IU54 200 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ADGRG5Q8IZF4 528 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 AHI1Q8N157 1196 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 EPS8L3Q8TE67 593 aaKnown RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 BCL7CQ8WUZ0 217 aaPredicted RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 C10orf82Q8WW14 230 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 TTC17Q96AE7 1141 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 TTC1Q99614 292 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 MRPL1Q9BYD6 325 aaKnown RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 MROQ9BYG7 248 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 GPAMQ9HCL2 828 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 TAS2R7Q9NYW3 318 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 KLHL14Q9P2G3 628 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 TBC1D14Q9P2M4 693 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 ANGPTL2Q9UKU9 493 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 DENND2AQ9ULE3 1009 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 A8MX80 341 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 CASQ2O14958 399 aaPredicted RBP6.66□□□□□ -1.34
SIK3-212ENST00000488337 FOXP2O15409 715 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 EXOC3O60645 756 aa6.66□□□□□ -1.34
SIK3-212ENST00000488337 TSPAN9O75954 239 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms