RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 DNA2P51530 1060 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 LILRA4P59901 499 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 PSMC1P62191 440 aaKnown RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 IFI16Q16666 785 aaKnown RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 PTPROQ16827 1216 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 UPP1Q16831 310 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 SOWAHAQ2M3V2 549 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 WSCD1Q658N2 575 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 ACAD10Q6JQN1 1059 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 PPP1R2P3Q6NXS1 205 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 DENND1BQ6P3S1 775 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 CNKSR3Q6P9H4 555 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 MMS22LQ6ZRQ5 1243 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 MON1BQ7L1V2 547 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 ACOT1Q86TX2 421 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 NPAS4Q8IUM7 802 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 PDCL2Q8N4E4 241 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 TMEM35BQ8NCS4 154 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 CYFIP2Q96F07 1278 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 DDX27Q96GQ7 796 aaKnown RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 SENP8Q96LD8 212 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 HEXIM2Q96MH2 286 aaKnown RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 FAM193BQ96PV7 902 aaPredicted RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 NUP85Q9BW27 656 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 DNAI2Q9GZS0 605 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 ISCUQ9H1K1 167 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 FAM124BQ9H5Z6 455 aaPredicted RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 ELAC1Q9H777 363 aaKnown RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 PRDM10Q9NQV6 1147 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 TBC1D13Q9NVG8 400 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 GDAP2Q9NXN4 497 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 CNOT8Q9UFF9 292 aaKnown RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 CHORDC1Q9UHD1 332 aaPredicted RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 GTF3C4Q9UKN8 822 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.35□□□□□ -1.232e-7■■■□□ 18.4
PDAP1-203ENST00000488214 PRG3Q9Y2Y8 225 aaPredicted RBP7.35□□□□□ -1.23
PDAP1-203ENST00000488214 NME7Q9Y5B8 376 aa7.35□□□□□ -1.23
PDAP1-203ENST00000488214 GBF1Q92538 1859 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 A0A0A6YYK5 440 aaPredicted RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 GRID2IPA4D2P6 1211 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 TRIM43BA6NCK2 446 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 TMEM110-MUSTN1A8MSY1 372 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 F8W810 466 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 O00370 1275 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 ENPP3O14638 875 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 ENC1O14682 589 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 KIAA0355O15063 1070 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 NCK2O43639 380 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 URI1O94763 535 aaPredicted RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 B3GAT3O94766 335 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 FTCDO95954 541 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 ATP1A1P05023 1023 aaKnown RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 CALB1P05937 261 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 PDGFRBP09619 1106 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 MYBL1P10243 752 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 CCDC130P13994 396 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 WARSP23381 471 aaKnown RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 IGFBP6P24592 240 aaPredicted RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 ACAT1P24752 427 aaKnown RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 ADORA2BP29275 332 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 GPC5P78333 572 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 FAM189BP81408 668 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 PDCLQ13371 301 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 CCDC142Q17RM4 750 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 C2CD6Q53TS8 623 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 LIN9Q5TKA1 542 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 SMYD5Q6GMV2 418 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 LLGL2Q6P1M3 1020 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 PHLDB2Q86SQ0 1253 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 UNC93AQ86WB7 457 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 ZNF280BQ86YH2 543 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 RHOT2Q8IXI1 618 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 MCOLN2Q8IZK6 566 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 LRRC43Q8N309 656 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 RNF10Q8N5U6 811 aaKnown RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 MSANTD4Q8NCY6 345 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 TPCN2Q8NHX9 752 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 ZNF564Q8TBZ8 553 aaPredicted RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 IPO4Q8TEX9 1081 aaKnown RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 TRIM43Q96BQ3 446 aaPredicted RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 SYT15Q9BQS2 421 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 MRPL9Q9BYD2 267 aaKnown RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 GOLPH3Q9H4A6 298 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 SYNCQ9H7C4 482 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 OSGEPQ9NPF4 335 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 ADAM22Q9P0K1 906 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 KANSL3Q9P2N6 904 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 HCSTQ9UBK5 93 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 HESX1Q9UBX0 185 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 TSPAN16Q9UKR8 245 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 PCDHGC5Q9Y5F6 944 aa7.34□□□□□ -1.23
PDAP1-203ENST00000488214 TIMM13Q9Y5L4 95 aaPredicted RBP7.34□□□□□ -1.23
PDAP1-203ENST00000488214 RIOK3O14730 519 aaKnown RBP7.33□□□□□ -1.24
PDAP1-203ENST00000488214 DDHD2O94830 711 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 UPP2O95045 317 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 TIMP1P01033 207 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 AMHP03971 560 aa7.33□□□□□ -1.24
PDAP1-203ENST00000488214 CYP1A2P05177 515 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms