RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 OPTNQ96CV9 577 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 FDXACB1Q9BRP7 624 aaPredicted RBP12.41□□□□□ -0.42
TRA2B-214ENST00000487615 TUBB6Q9BUF5 446 aa12.41□□□□□ -0.42
TRA2B-214ENST00000487615 TUBGCP6Q96RT7 1819 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 IRS2Q9Y4H2 1338 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 ADM5C9JUS6 153 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 H3BRJ5 948 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 NPTXRO95502 500 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 CORO7P57737 925 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 COPS2P61201 443 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 PTPN11Q06124 597 aaPredicted RBP12.4□□□□□ -0.42
TRA2B-214ENST00000487615 RCN2Q14257 317 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 SPATA21Q7Z572 469 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 REPS2Q8NFH8 660 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 LRRC37BQ96QE4 947 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 XPO7Q9UIA9 1087 aaKnown RBP12.4□□□□□ -0.42
TRA2B-214ENST00000487615 KIAA1257Q9ULG3 409 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 ARHGAP42A6NI28 874 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 RASSF10A6NK89 507 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 LPXNO60711 386 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 CYP1A2P05177 515 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 C4AP0C0L4 1744 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 INSRRP14616 1297 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 GOLGA7BQ2TAP0 167 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 DCAF4L1Q3SXM0 396 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 MAML1Q92585 1016 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 ADAM33Q9BZ11 813 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 VTNP04004 478 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 MAP2K2P36507 400 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 BOLA3Q53S33 107 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 KCNT1Q5JUK3 1230 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 AADACL2Q6P093 401 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 SPOCD1Q6ZMY3 1216 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 CD302Q8IX05 232 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 PPIL6Q8IXY8 311 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 C3orf20Q8ND61 904 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 TRAPPC12Q8WVT3 735 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 MFSD14AQ96MC6 490 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 DCLK3Q9C098 648 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 CYP3A43Q9HB55 503 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRA2B-214ENST00000487615 PAK5Q9P286 719 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 ARL2BPQ9Y2Y0 163 aa12.4□□□□□ -0.42
TRA2B-214ENST00000487615 LRP5O75197 1615 aa12.4□□□□□ -0.43
TRA2B-214ENST00000487615 IRX4P78413 519 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 NME3Q13232 169 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 C4orf33Q8N1A6 199 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 AFG1LQ8WV93 481 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 RAPGEF5Q92565 580 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TLK1Q9UKI8 766 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 INPP5FQ9Y2H2 1132 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 USP15Q9Y4E8 981 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 CSDE1O75534 798 aaKnown RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 ATP5HO75947 161 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 MARCKSL1P49006 195 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 C9orf131Q5VYM1 1079 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 C3orf62Q6ZUJ4 267 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 CFAP61Q8NHU2 1237 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TRPM4Q8TD43 1214 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 KREMEN1Q96MU8 473 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 H3BRB1 525 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 GIPC1O14908 333 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 CRCPO75575 148 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TTC4O95801 387 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 RAP1GAPP47736 663 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 GCLCP48506 637 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 SKOR1P84550 965 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 AP1B1Q10567 949 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TAF1CQ15572 869 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TDRD10Q5VZ19 366 aaKnown RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 RWDD4Q6NW29 188 aaKnown RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 ALG3Q92685 438 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 FRMD8P1Q9BZ68 369 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TUT1Q9H6E5 874 aaKnown RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 CHMP2BQ9UQN3 213 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 MYH1P12882 1939 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 NAV1Q8NEY1 1877 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 RARBP10826 455 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 ATICP31939 592 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 STIP1P31948 543 aaKnown RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 EPHX2P34913 555 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TTMPQ5BVD1 217 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 SYCP2LQ5T4T6 812 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 ABHD15Q6UXT9 468 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 ALKBH8Q96BT7 664 aaKnown RBP12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TMEM176AQ96HP8 235 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 BCAS3Q9H6U6 928 aa12.39□□□□□ -0.43
TRA2B-214ENST00000487615 TNPO2O14787 897 aaKnown RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 OTUD4Q01804 1114 aaKnown RBP12.38□□□□□ -0.43
TRA2B-214ENST00000487615 MTM1Q13496 603 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CAPSQ13938 189 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 CRLF3Q8IUI8 442 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 EMC1Q8N766 993 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
TRA2B-214ENST00000487615 LRRC57Q8N9N7 239 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms