RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 BFSP1Q12934 665 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 CUL4BQ13620 913 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 NFE2Q16621 373 aaPredicted RBP20.53■□□□□ 0.88
CLIP2-206ENST00000487091 BMT2Q1RMZ1 405 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 VITQ6UXI7 678 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 GAREM2Q75VX8 874 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 TOP6BLQ8N6T0 577 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 IRF7Q92985 503 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 NELL2Q99435 816 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 SLITRK6Q9H5Y7 841 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 BRD9Q9H8M2 597 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 ZNF334Q9HCZ1 680 aaPredicted RBP20.53■□□□□ 0.88
CLIP2-206ENST00000487091 CGNQ9P2M7 1197 aaKnown RBP20.53■□□□□ 0.88
CLIP2-206ENST00000487091 PCDHB5Q9Y5E4 795 aa20.53■□□□□ 0.88
CLIP2-206ENST00000487091 F5P12259 2224 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 ATF6P18850 670 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 CMA1P23946 247 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 VIPR2P41587 438 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 MYL7Q01449 175 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 MYO1EQ12965 1108 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 GRM2Q14416 872 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 SNRNP35Q16560 246 aaKnown RBP20.52■□□□□ 0.88
CLIP2-206ENST00000487091 SCARA3Q6AZY7 606 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 DPH6Q7L8W6 267 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 HS2ST1Q7LGA3 356 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 WDR49Q8IV35 697 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 MFSD6LQ8IWD5 586 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 OR5B17Q8NGF7 314 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 LEO1Q8WVC0 666 aaPredicted RBP20.52■□□□□ 0.88
CLIP2-206ENST00000487091 FAM84AQ96KN4 292 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 LTB4R2Q9NPC1 389 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 DDX43Q9NXZ2 648 aaKnown RBP20.52■□□□□ 0.88
CLIP2-206ENST00000487091 ABI2Q9NYB9 513 aaPredicted RBP20.52■□□□□ 0.88
CLIP2-206ENST00000487091 USP25Q9UHP3 1055 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 SERTAD1Q9UHV2 236 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 SNX9Q9Y5X1 595 aa20.52■□□□□ 0.88
CLIP2-206ENST00000487091 ZFHX2Q9C0A1 2572 aaPredicted RBP20.52■□□□□ 0.88
CLIP2-206ENST00000487091 CACNA1IQ9P0X4 2223 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 FAM170BA6NMN3 283 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 HEPACAM2A8MVW5 462 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 GFRA3O60609 400 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 GLULP15104 373 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 GABRR2P28476 465 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 MAGEA9P43362 315 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 LHX1P48742 406 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 KRT85P78386 507 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 UBXN2BQ14CS0 331 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 ARHGAP15Q53QZ3 475 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 LMBRD2Q68DH5 695 aaPredicted RBP20.51■□□□□ 0.87
CLIP2-206ENST00000487091 ZNF852Q6ZMS4 543 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 TPRG1Q6ZUI0 275 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 NELFCDQ8IXH7 590 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 C12orf56Q8IXR9 622 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 XXYLT1Q8NBI6 393 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 FAM200AQ8TCP9 573 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 LPIN3Q9BQK8 851 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 ATXN3LQ9H3M9 355 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 SLC39A2Q9NP94 309 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 HEBP1Q9NRV9 189 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 TMLHEQ9NVH6 421 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 MRPS17Q9Y2R5 130 aaKnown RBP20.51■□□□□ 0.87
CLIP2-206ENST00000487091 ZDHHC9Q9Y397 364 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 PTPRJQ12913 1337 aa20.51■□□□□ 0.87
CLIP2-206ENST00000487091 GABRDO14764 452 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 CLIC2O15247 247 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 ACTN4O43707 911 aaKnown RBP20.5■□□□□ 0.87
CLIP2-206ENST00000487091 PRPF40AO75400 957 aaKnown RBP20.5■□□□□ 0.87
CLIP2-206ENST00000487091 WEE1P30291 646 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 CDC25CP30307 473 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 GDI1P31150 447 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 PSMD6Q15008 389 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 TAF12Q16514 161 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 KNOP1Q1ED39 458 aaKnown RBP20.5■□□□□ 0.87
CLIP2-206ENST00000487091 SOWAHAQ2M3V2 549 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 INTS6LQ5JSJ4 861 aaKnown RBP20.5■□□□□ 0.87
CLIP2-206ENST00000487091 LIMS2Q7Z4I7 341 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 ARID3BQ8IVW6 561 aaPredicted RBP20.5■□□□□ 0.87
CLIP2-206ENST00000487091 C1orf210Q8IVY1 113 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 RDH13Q8NBN7 331 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 PAGE5Q96GU1 130 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 HPDLQ96IR7 371 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 MKNK1Q9BUB5 465 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 BCO2Q9BYV7 579 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 IL21Q9HBE4 155 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 ABCB6Q9NP58 842 aa20.5■□□□□ 0.87
CLIP2-206ENST00000487091 MTF2Q9Y483 593 aaPredicted RBP20.5■□□□□ 0.87
CLIP2-206ENST00000487091 USP34Q70CQ2 3546 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.49■□□□□ 0.87
CLIP2-206ENST00000487091 MAN2B1O00754 1011 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 ZNF263O14978 683 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 NCAM2O15394 837 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 KLRC4O43908 158 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 LRRN2O75325 713 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 CD72P21854 359 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 PCSK1P29120 753 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 CYP2J2P51589 502 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 CYP24A1Q07973 514 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 STXBP5Q5T5C0 1151 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 GPR158Q5T848 1215 aa20.49■□□□□ 0.87
CLIP2-206ENST00000487091 FRMD5Q7Z6J6 570 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms