RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MAGEA9P43362 315 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 CYP4F8P98187 520 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 BFSP1Q12934 665 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 ZC3H14Q6PJT7 736 aaKnown RBP26.44■■□□□ 1.82
LIME1-206ENST00000487026 DCP1BQ8IZD4 617 aaKnown RBP26.44■■□□□ 1.82
LIME1-206ENST00000487026 PDCL2Q8N4E4 241 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 CXorf38Q8TB03 319 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 FAM3CQ92520 227 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 SNX21Q969T3 373 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 TNMDQ9H2S6 317 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 TRPV5Q9NQA5 729 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 KBTBD4Q9NVX7 518 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 FBXO4Q9UKT5 387 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 L1RE1Q9UN81 338 aa26.44■■□□□ 1.82
LIME1-206ENST00000487026 TICRRQ7Z2Z1 1910 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 ARNTLO00327 626 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 FGF19O95750 216 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 KRT19P08727 400 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 HOXD13P35453 343 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 RPS9P46781 194 aaKnown RBP26.43■■□□□ 1.82
LIME1-206ENST00000487026 MTAPQ13126 283 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 VEPH1Q14D04 833 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 TAF12Q16514 161 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 ARHGAP15Q53QZ3 475 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 SHC4Q6S5L8 630 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 TSSK4Q6SA08 328 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 GPD1LQ8N335 351 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 TTC8Q8TAM2 541 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 SPPL2BQ8TCT7 592 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 C2orf15Q8WU43 125 aaKnown RBP26.43■■□□□ 1.82
LIME1-206ENST00000487026 TRIM9Q9C026 710 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 IL21Q9HBE4 155 aa26.43■■□□□ 1.82
LIME1-206ENST00000487026 CUTAO60888 179 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 HUS1O60921 280 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 ACAT1P24752 427 aaKnown RBP26.42■■□□□ 1.82
LIME1-206ENST00000487026 CCNE1P24864 410 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 GPR15P49685 360 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 SMARCB1Q12824 385 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 ZNF528Q3MIS6 628 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 ZFYVE19Q96K21 471 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 PI4K2AQ9BTU6 479 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 MTMR12Q9C0I1 747 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 LRRC27Q9C0I9 530 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 LMAN1LQ9HAT1 526 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 SIX4Q9UIU6 781 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 PCDHB5Q9Y5E4 795 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 ZNF292O60281 2723 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 COL4A2P08572 1712 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 PATJQ8NI35 1801 aa26.42■■□□□ 1.82
LIME1-206ENST00000487026 DPYSL4O14531 572 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 CHADO15335 359 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 YEATS4O95619 227 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 SOX9P48436 509 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 ASIC1P78348 528 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 TSPY1Q01534 308 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 FCHO2Q0JRZ9 810 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 STKLD1Q8NE28 680 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 CSGALNACT1Q8TDX6 532 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 SMG9Q9H0W8 520 aaKnown RBP26.41■■□□□ 1.82
LIME1-206ENST00000487026 DDX43Q9NXZ2 648 aaKnown RBP26.41■■□□□ 1.82
LIME1-206ENST00000487026 ITGA11Q9UKX5 1188 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 SNX9Q9Y5X1 595 aa26.41■■□□□ 1.82
LIME1-206ENST00000487026 PTPRJQ12913 1337 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 SLC38A8A6NNN8 435 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 PRPF40AO75400 957 aaKnown RBP26.4■■□□□ 1.82
LIME1-206ENST00000487026 PRAMEF12O95522 483 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 TMEM191BP0C7N4 346 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 RBP5P82980 135 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 SDHAF4Q5VUM1 108 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 STXBP4Q6ZWJ1 553 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 OSTM1Q86WC4 334 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 CBWD2Q8IUF1 395 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 LRRC52Q8N7C0 313 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 IQUBQ8NA54 791 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 OR5B17Q8NGF7 314 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 SLC46A2Q9BY10 475 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 CUEDC2Q9H467 287 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 TASP1Q9H6P5 420 aa26.4■■□□□ 1.82
LIME1-206ENST00000487026 FANCMQ8IYD8 2048 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 HCRTO43612 131 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 ZSCAN22P10073 491 aaPredicted RBP26.39■■□□□ 1.82
LIME1-206ENST00000487026 CASP1P29466 404 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 CDC25CP30307 473 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 KPNA1P52294 538 aaPredicted RBP26.39■■□□□ 1.82
LIME1-206ENST00000487026 AMPD3Q01432 767 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 CCDC142Q17RM4 750 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 SPRYD3Q8NCJ5 442 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 GCNAQ96QF7 691 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 ACBD6Q9BR61 282 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 INTS13Q9NVM9 706 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 GDAP2Q9NXN4 497 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 HSPBP1Q9NZL4 362 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 GTF3C4Q9UKN8 822 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 FRYLO94915 3013 aa26.39■■□□□ 1.82
LIME1-206ENST00000487026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.38■■□□□ 1.81
LIME1-206ENST00000487026 ZNF233A6NK53 670 aa26.38■■□□□ 1.81
LIME1-206ENST00000487026 POLR2DO15514 142 aaKnown RBP26.38■■□□□ 1.81
LIME1-206ENST00000487026 KINO60870 393 aaKnown RBP26.38■■□□□ 1.81
LIME1-206ENST00000487026 HSP90AA1P07900 732 aaKnown RBP26.38■■□□□ 1.81
LIME1-206ENST00000487026 HMGA1P17096 107 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms