RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 EDAQ92838 391 aa15.82■□□□□ 0.12
USP4-212ENST00000486549 DUSP9Q99956 384 aaKnown RBP15.82■□□□□ 0.12
USP4-212ENST00000486549 MRPL45Q9BRJ2 306 aaKnown RBP15.82■□□□□ 0.12
USP4-212ENST00000486549 XYLT2Q9H1B5 865 aa15.82■□□□□ 0.12
USP4-212ENST00000486549 CRISPLD1Q9H336 500 aa15.82■□□□□ 0.12
USP4-212ENST00000486549 WDR6Q9NNW5 1121 aaKnown RBP15.82■□□□□ 0.12
USP4-212ENST00000486549 HCFC1R1Q9NWW0 138 aa15.82■□□□□ 0.12
USP4-212ENST00000486549 MUTYHQ9UIF7 546 aa15.82■□□□□ 0.12
USP4-212ENST00000486549 SLC27A5Q9Y2P5 690 aa15.82■□□□□ 0.12
USP4-212ENST00000486549 YIPF1Q9Y548 306 aa15.82■□□□□ 0.12
USP4-212ENST00000486549 STAU1O95793 577 aaKnown RBP15.81■□□□□ 0.12
USP4-212ENST00000486549 LHX1P48742 406 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 CCDC40Q4G0X9 1142 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 ZNF667Q5HYK9 610 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 RTL10Q7L3V2 364 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 DPH6Q7L8W6 267 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 LRRTM3Q86VH5 581 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 DCP1BQ8IZD4 617 aaKnown RBP15.81■□□□□ 0.12
USP4-212ENST00000486549 TTC9BQ8N6N2 239 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 TDRD5Q8NAT2 981 aaKnown RBP15.81■□□□□ 0.12
USP4-212ENST00000486549 SEPT5Q99719 369 aaPredicted RBP15.81■□□□□ 0.12
USP4-212ENST00000486549 RHOBTB2Q9BYZ6 727 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 SNX25Q9H3E2 840 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 SMYD3Q9H7B4 428 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 ABI2Q9NYB9 513 aaPredicted RBP15.81■□□□□ 0.12
USP4-212ENST00000486549 ARMCX3Q9UH62 379 aaPredicted RBP15.81■□□□□ 0.12
USP4-212ENST00000486549 MAFFQ9ULX9 164 aa15.81■□□□□ 0.12
USP4-212ENST00000486549 SOAT2O75908 522 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 PAPLNO95428 1278 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 WARSP23381 471 aaKnown RBP15.8■□□□□ 0.12
USP4-212ENST00000486549 LMO2P25791 158 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 PCSK1P29120 753 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 GBP2P32456 591 aaPredicted RBP15.8■□□□□ 0.12
USP4-212ENST00000486549 RAP1GAPP47736 663 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 MXI1P50539 228 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 PSMC1P62191 440 aaKnown RBP15.8■□□□□ 0.12
USP4-212ENST00000486549 ENPEPQ07075 957 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 CCDC142Q17RM4 750 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 SGSM1Q2NKQ1 1148 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 INTS6LQ5JSJ4 861 aaKnown RBP15.8■□□□□ 0.12
USP4-212ENST00000486549 SPOPLQ6IQ16 392 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 OTOP3Q7RTS5 596 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 ELMOD1Q8N336 334 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 PLCD3Q8N3E9 789 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 OR6B3Q8NGW1 331 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 SPATA18Q8TC71 538 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 TAS1R2Q8TE23 839 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 CEP63Q96MT8 703 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 SYT15Q9BQS2 421 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 ACBD6Q9BR61 282 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 PI4K2AQ9BTU6 479 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 IMPG2Q9BZV3 1241 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 KCNH6Q9H252 994 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 TMEM8AQ9HCN3 771 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 C11orf16Q9NQ32 467 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 TMLHEQ9NVH6 421 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 DNMT3BQ9UBC3 853 aaKnown RBP15.8■□□□□ 0.12
USP4-212ENST00000486549 USTQ9Y2C2 406 aa15.8■□□□□ 0.12
USP4-212ENST00000486549 NOTCH4Q99466 2003 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 FAM86C2PA6NEL3 165 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 GABRDO14764 452 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 STX10O60499 249 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 POU2F2P09086 479 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 PDGFRBP09619 1106 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 FSHRP23945 695 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 ALDH1A3P47895 512 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 PLD1Q13393 1074 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 MGAT5BQ3V5L5 792 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 PABPC1LQ4VXU2 614 aaKnown RBP15.79■□□□□ 0.12
USP4-212ENST00000486549 KRT39Q6A163 491 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 LIMS2Q7Z4I7 341 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 FILIP1Q7Z7B0 1213 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 ACSF2Q96CM8 615 aaPredicted RBP15.79■□□□□ 0.12
USP4-212ENST00000486549 CORO1BQ9BR76 489 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 VRTNQ9H8Y1 702 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 GTF3C4Q9UKN8 822 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 PCDHB5Q9Y5E4 795 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 DOCK8Q8NF50 2099 aa15.79■□□□□ 0.12
USP4-212ENST00000486549 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
USP4-212ENST00000486549 ATP2C2O75185 946 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 TACC1O75410 805 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 MBD3O95983 291 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 ASS1P00966 412 aaKnown RBP15.78■□□□□ 0.12
USP4-212ENST00000486549 P4HA1P13674 534 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 PTPN2P17706 415 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 GTF2H1P32780 548 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 GNL1P36915 607 aaPredicted RBP15.78■□□□□ 0.12
USP4-212ENST00000486549 CDH8P55286 799 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 NFE2Q16621 373 aaPredicted RBP15.78■□□□□ 0.12
USP4-212ENST00000486549 DPCR1Q3MIW9 517 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 IQCEQ6IPM2 695 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 MLKLQ8NB16 471 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 CCDC150Q8NCX0 1101 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 FAM200AQ8TCP9 573 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 SPPL2BQ8TCT7 592 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 C2orf15Q8WU43 125 aaKnown RBP15.78■□□□□ 0.12
USP4-212ENST00000486549 ING5Q8WYH8 240 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 TAF4BQ92750 862 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 FAM122AQ96E09 287 aa15.78■□□□□ 0.12
USP4-212ENST00000486549 ZNF512Q96ME7 567 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms