RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 MCEEQ96PE7 176 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 USTQ9Y2C2 406 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 NPTXRO95502 500 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 CYP2C9P11712 490 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 FLT3P36888 993 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 CPT1AP50416 773 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 UAP1Q16222 522 aaPredicted RBP21.56■■□□□ 1.04
HPS3-206ENST00000486530 DAB2IPQ5VWQ8 1189 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 CCDC50Q8IVM0 306 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 KIF12Q96FN5 646 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 TMEM176AQ96HP8 235 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 FAM129AQ9BZQ8 928 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 SNX24Q9Y343 169 aa21.56■■□□□ 1.04
HPS3-206ENST00000486530 KRT14P02533 472 aa21.55■■□□□ 1.04
HPS3-206ENST00000486530 GSCP56915 257 aaPredicted RBP21.55■■□□□ 1.04
HPS3-206ENST00000486530 IRX5P78411 483 aaPredicted RBP21.55■■□□□ 1.04
HPS3-206ENST00000486530 TMEM62Q0P6H9 643 aa21.55■■□□□ 1.04
HPS3-206ENST00000486530 PIGHQ14442 188 aaPredicted RBP21.55■■□□□ 1.04
HPS3-206ENST00000486530 TTMPQ5BVD1 217 aa21.55■■□□□ 1.04
HPS3-206ENST00000486530 ELOVL4Q9GZR5 314 aa21.55■■□□□ 1.04
HPS3-206ENST00000486530 HOMER3Q9NSC5 361 aa21.55■■□□□ 1.04
HPS3-206ENST00000486530 GINS2Q9Y248 185 aa21.55■■□□□ 1.04
HPS3-206ENST00000486530 Q9Y3F1 56 aa21.55■■□□□ 1.04
HPS3-206ENST00000486530 PPFIA2O75334 1257 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 HOXA11P31270 313 aaPredicted RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 CETN2P41208 172 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 SSR1P43307 286 aaKnown RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 PSEN2P49810 448 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 DHX9Q08211 1270 aaKnown RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 INCA1Q0VD86 236 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 KCTD19Q17RG1 926 aaPredicted RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 PTPN20Q4JDL3 420 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 LRRC38Q5VT99 294 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 NOTUMQ6P988 496 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 TMEM130Q8N3G9 435 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 NIPA2Q8N8Q9 360 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 ARL8AQ96BM9 186 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 TWNKQ96RR1 684 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 ARHGAP39Q9C0H5 1083 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 GRHL1Q9NZI5 618 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 HMGXB4Q9UGU5 601 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 HAS3O00219 553 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 O00370 1275 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 RALAP11233 206 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 DARSP14868 501 aaKnown RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 RPL21P46778 160 aaKnown RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 ZNF252P-AS1Q0IIN9 211 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 KLF1Q13351 362 aaPredicted RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 ZDHHC24Q6UX98 284 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 SYDE1Q6ZW31 735 aaPredicted RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 GRK7Q8WTQ7 553 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 UBLCP1Q8WVY7 318 aaPredicted RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 C1orf54Q8WWF1 131 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 RBM41Q96IZ5 413 aaKnown RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 SNX27Q96L92 541 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 OSMRQ99650 979 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 TXLNGYQ9BZA5 131 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 WDR35Q9P2L0 1181 aa21.54■■□□□ 1.04
HPS3-206ENST00000486530 BARX2Q9UMQ3 279 aaPredicted RBP21.54■■□□□ 1.04
HPS3-206ENST00000486530 TRIP12Q14669 1992 aaPredicted RBP21.53■■□□□ 1.04
HPS3-206ENST00000486530 VDRP11473 427 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 AXLP30530 894 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 PLTPP55058 493 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 ADAM17P78536 824 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 CYP4A22Q5TCH4 519 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 RUFY4Q6ZNE9 571 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 PKNOX2Q96KN3 472 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 KATNAL1Q9BW62 490 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 OSBPL8Q9BZF1 889 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 DCLK3Q9C098 648 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 AP5M1Q9H0R1 490 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 MTRF1LQ9UGC7 380 aaKnown RBP21.53■■□□□ 1.04
HPS3-206ENST00000486530 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.53■■□□□ 1.04
HPS3-206ENST00000486530 PTPN22Q9Y2R2 807 aa21.53■■□□□ 1.04
HPS3-206ENST00000486530 GOLGA6L10A6NI86 522 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 H0YGN5 161 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 ALDH1A1P00352 501 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 HMGCRP04035 888 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 PSMC4P43686 418 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 KCNJ1P48048 391 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 YARSP54577 528 aaKnown RBP21.52■■□□□ 1.04
HPS3-206ENST00000486530 MYO1EQ12965 1108 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 LLGL1Q15334 1064 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 PPP1R7Q15435 360 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 RCOR2Q8IZ40 523 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 FBXO25Q8TCJ0 367 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 HERPUD2Q9BSE4 406 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 FEZ2Q9UHY8 353 aaPredicted RBP21.52■■□□□ 1.04
HPS3-206ENST00000486530 NFS1Q9Y697 457 aa21.52■■□□□ 1.04
HPS3-206ENST00000486530 MICAL2O94851 1124 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 GJC1P36383 396 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 FCGRTP55899 365 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 OGDHQ02218 1023 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 ORC1Q13415 861 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 CNGA2Q16280 664 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 DEFB115Q30KQ5 88 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 CEP85LQ5SZL2 805 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 TRPV1Q8NER1 839 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 FNIP1Q8TF40 1166 aa21.52■■□□□ 1.03
HPS3-206ENST00000486530 CDHR5Q9HBB8 845 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms