RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 NUP58Q9BVL2 599 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 LSM14BQ9BX40 385 aaKnown RBP24.36■■□□□ 1.49
NBPF3-212ENST00000486229 SMYD3Q9H7B4 428 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 UBE2TQ9NPD8 197 aaPredicted RBP24.36■■□□□ 1.49
NBPF3-212ENST00000486229 IFNKQ9P0W0 207 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 FBXL5Q9UKA1 691 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 CPB1P15086 417 aa24.35■■□□□ 1.49
NBPF3-212ENST00000486229 SCARA3Q6AZY7 606 aa24.35■■□□□ 1.49
NBPF3-212ENST00000486229 KLHL5Q96PQ7 755 aa24.35■■□□□ 1.49
NBPF3-212ENST00000486229 NT5C1AQ9BXI3 368 aa24.35■■□□□ 1.49
NBPF3-212ENST00000486229 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.35■■□□□ 1.49
NBPF3-212ENST00000486229 CISHQ9NSE2 258 aa24.35■■□□□ 1.49
NBPF3-212ENST00000486229 CDY1Q9Y6F8 540 aa24.35■■□□□ 1.49
NBPF3-212ENST00000486229 TBC1D4O60343 1298 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 CNPP09543 421 aaKnown RBP24.34■■□□□ 1.49
NBPF3-212ENST00000486229 WEE2P0C1S8 567 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 IRS1P35568 1242 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 KCNMA1Q12791 1236 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 RAB33AQ14088 237 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 KLHDC7AQ5VTJ3 777 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 PHLDB3Q6NSJ2 640 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 RTL10Q7L3V2 364 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 GAS2L3Q86XJ1 694 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 KBTBD7Q8WVZ9 684 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 AUTS2Q8WXX7 1259 aa24.34■■□□□ 1.49
NBPF3-212ENST00000486229 MRPL45Q9BRJ2 306 aaKnown RBP24.34■■□□□ 1.49
NBPF3-212ENST00000486229 TEX28O15482 410 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 CSPG5O95196 566 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 OR1D2P34982 312 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 PLA2G5P39877 138 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 INTS6LQ5JSJ4 861 aaKnown RBP24.33■■□□□ 1.49
NBPF3-212ENST00000486229 C4orf50Q6ZRC1 276 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 RRAGAQ7L523 313 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 ZNF461Q8TAF7 563 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 HDAC7Q8WUI4 952 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 NAP1L5Q96NT1 182 aaPredicted RBP24.33■■□□□ 1.49
NBPF3-212ENST00000486229 SYT15Q9BQS2 421 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 CLSTN3Q9BQT9 956 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 TRIM5Q9C035 493 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 ZCWPW1Q9H0M4 648 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 DNAJC12Q9UKB3 198 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 KIAA1257Q9ULG3 409 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 SIK3Q9Y2K2 1263 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 MTCH2Q9Y6C9 303 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 XIRP2A4UGR9 3374 aa24.33■■□□□ 1.49
NBPF3-212ENST00000486229 ATP8B3O60423 1300 aa24.33■■□□□ 1.48
NBPF3-212ENST00000486229 HIDE1A8MVS5 230 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 LRRN2O75325 713 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 CILPO75339 1184 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 GLUD1P00367 558 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 UCHL3P15374 230 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 CD58P19256 250 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 ELF1P32519 619 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 RAP1GAPP47736 663 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 CDH8P55286 799 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 GPR17Q13304 367 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 DUSP6Q16828 381 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 ASB2Q96Q27 587 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 FAM207AQ9NSI2 230 aaPredicted RBP24.32■■□□□ 1.48
NBPF3-212ENST00000486229 HSFX1Q9UBD0 423 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 PCDHB4Q9Y5E5 795 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.32■■□□□ 1.48
NBPF3-212ENST00000486229 TRANK1O15050 2925 aa24.32■■□□□ 1.48
NBPF3-212ENST00000486229 NDST1P52848 882 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 CACNA2D4Q7Z3S7 1137 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 ARHGEF19Q8IW93 802 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 CRYBG2Q8N1P7 616 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 SPAG5Q96R06 1193 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 STK33Q9BYT3 514 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 EDEM3Q9BZQ6 932 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 XPO4Q9C0E2 1151 aaKnown RBP24.31■■□□□ 1.48
NBPF3-212ENST00000486229 PLEKHA4Q9H4M7 779 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 SIX2Q9NPC8 291 aa24.31■■□□□ 1.48
NBPF3-212ENST00000486229 AFF4Q9UHB7 1163 aaKnown RBP24.31■■□□□ 1.48
NBPF3-212ENST00000486229 TEX33O43247 280 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 PAEPP09466 180 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 TPM1P09493 284 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 PDGFRBP09619 1106 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 CCDC172P0C7W6 258 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 ARPP19P56211 112 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 BPIFB4P59827 614 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 ROR1Q01973 937 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 RAPGEF1Q13905 1077 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 CCDC149Q6ZUS6 474 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 OSTM1Q86WC4 334 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 B3GALNT2Q8NCR0 500 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 SPPL2BQ8TCT7 592 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 FUBP3Q96I24 572 aaKnown RBP eCLIP24.3■■□□□ 1.48
NBPF3-212ENST00000486229 SDCBP2Q9H190 292 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 CEP72Q9P209 647 aa24.3■■□□□ 1.48
NBPF3-212ENST00000486229 TCF20Q9UGU0 1960 aaKnown RBP24.3■■□□□ 1.48
NBPF3-212ENST00000486229 CLASP2O75122 1294 aaKnown RBP24.29■■□□□ 1.48
NBPF3-212ENST00000486229 KRT5P13647 590 aa24.29■■□□□ 1.48
NBPF3-212ENST00000486229 PTPN1P18031 435 aaKnown RBP24.29■■□□□ 1.48
NBPF3-212ENST00000486229 RPL17P18621 184 aaKnown RBP24.29■■□□□ 1.48
NBPF3-212ENST00000486229 NRIP1P48552 1158 aa24.29■■□□□ 1.48
NBPF3-212ENST00000486229 TRIM14Q14142 442 aa24.29■■□□□ 1.48
NBPF3-212ENST00000486229 STILQ15468 1287 aa24.29■■□□□ 1.48
NBPF3-212ENST00000486229 ARHGAP44Q17R89 818 aa24.29■■□□□ 1.48
NBPF3-212ENST00000486229 FIGNQ5HY92 759 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms