RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 TRPV5Q9NQA5 729 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 INSL5Q9Y5Q6 135 aa19.04■□□□□ 0.64
MCF2L-226ENST00000486210 UBE4BO95155 1302 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 HNRNPDLO14979 420 aaKnown RBP19.03■□□□□ 0.64
MCF2L-226ENST00000486210 RETP07949 1114 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 MCF2P10911 925 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 HARSP12081 509 aaKnown RBP19.03■□□□□ 0.64
MCF2L-226ENST00000486210 PSMC3P17980 439 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 GDI1P31150 447 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 ELF1P32519 619 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 ABCD1P33897 745 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 LIG4P49917 911 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 CCR3P51677 355 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 ARPP19P56211 112 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 MRPL58Q14197 206 aaKnown RBP19.03■□□□□ 0.64
MCF2L-226ENST00000486210 KNOP1Q1ED39 458 aaKnown RBP19.03■□□□□ 0.64
MCF2L-226ENST00000486210 ALKAL1Q6UXT8 129 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 ZPBP2Q6X784 338 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 PRR23BQ6ZRT6 265 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 PDZD4Q76G19 769 aaPredicted RBP19.03■□□□□ 0.64
MCF2L-226ENST00000486210 TCEAL8Q8IYN2 117 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 SYCP3Q8IZU3 236 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 GUF1Q8N442 669 aaKnown RBP19.03■□□□□ 0.64
MCF2L-226ENST00000486210 TRIML1Q8N9V2 468 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 TMEM206Q9H813 350 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 SEMA4GQ9NTN9 838 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 RAB23Q9ULC3 237 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 EXOC7Q9UPT5 735 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 NUB1Q9Y5A7 615 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 PIAS3Q9Y6X2 628 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 CITO14578 2027 aa19.03■□□□□ 0.64
MCF2L-226ENST00000486210 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.02■□□□□ 0.64
MCF2L-226ENST00000486210 PPP1R3GB7ZBB8 358 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 ARNTLO00327 626 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 PRRG1O14668 218 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 ZNF197O14709 1029 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 HRO43593 1189 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 GJA1P17302 382 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 ADSSP30520 456 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 VIPR2P41587 438 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 SRSF5Q13243 272 aaKnown RBP19.02■□□□□ 0.64
MCF2L-226ENST00000486210 COBLL1Q53SF7 1204 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 XKR4Q5GH76 650 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 WDR44Q5JSH3 913 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 MPZL3Q6UWV2 235 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 SMARCD2Q92925 531 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 SYAP1Q96A49 352 aaPredicted RBP19.02■□□□□ 0.64
MCF2L-226ENST00000486210 ZMAT2Q96NC0 199 aaKnown RBP19.02■□□□□ 0.64
MCF2L-226ENST00000486210 KCTD10Q9H3F6 313 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 CEP72Q9P209 647 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 ANKFY1Q9P2R3 1169 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 FBXL5Q9UKA1 691 aa19.02■□□□□ 0.64
MCF2L-226ENST00000486210 PODXLO00592 558 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 GDF9O60383 454 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 LRP3O75074 770 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 TOM1L1O75674 476 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 MATR3P43243 847 aaKnown RBP eCLIP19.01■□□□□ 0.63
MCF2L-226ENST00000486210 CXCL12P48061 93 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 NLRP12P59046 1061 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 PPP2R5DQ14738 602 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 PRR23CQ6ZRP0 262 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 ZSWIM2Q8NEG5 633 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 STYXL1Q9Y6J8 313 aa19.01■□□□□ 0.63
MCF2L-226ENST00000486210 CHURC1-FNTBB4DL54 471 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 H7C4K7 107 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 K7ESF4 209 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 SYN3O14994 580 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 CLIC2O15247 247 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 MEFVO15553 781 aaPredicted RBP19■□□□□ 0.63
MCF2L-226ENST00000486210 CCNE1P24864 410 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 RPL9P32969 192 aaKnown RBP19■□□□□ 0.63
MCF2L-226ENST00000486210 FNTBP49356 437 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 PMS1P54277 932 aaKnown RBP19■□□□□ 0.63
MCF2L-226ENST00000486210 MCL1Q07820 350 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 SIM2Q14190 667 aaPredicted RBP19■□□□□ 0.63
MCF2L-226ENST00000486210 DPCR1Q3MIW9 517 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 SEZ6Q53EL9 994 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 DEPDC1BQ8WUY9 529 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 RSPRY1Q96DX4 576 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 CBWD1Q9BRT8 395 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 PCIF1Q9H4Z3 704 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 TRPV4Q9HBA0 871 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 AGPAT3Q9NRZ7 376 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 RBM12Q9NTZ6 932 aaKnown RBP19■□□□□ 0.63
MCF2L-226ENST00000486210 GREB1Q4ZG55 1949 aa19■□□□□ 0.63
MCF2L-226ENST00000486210 A0A0B4J269 797 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 CLDN3O15551 220 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 KCNE1P15382 129 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 HOXC13P31276 330 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 EPHA5P54756 1037 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 TWF1Q12792 350 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 NOLC1Q14978 699 aaKnown RBP eCLIP18.99■□□□□ 0.633e-6■■■■■ 34
MCF2L-226ENST00000486210 CSRP2Q16527 193 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 CYP4A22Q5TCH4 519 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 TPGS2Q68CL5 300 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 KLHL10Q6JEL2 608 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 MFSD6LQ8IWD5 586 aa18.99■□□□□ 0.63
MCF2L-226ENST00000486210 ZSCAN18Q8TBC5 510 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-226ENST00000486210 GTPBP4Q9BZE4 634 aaKnown RBP18.99■□□□□ 0.63
MCF2L-226ENST00000486210 C2orf42Q9NWW7 574 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms