RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 CTTNBP2NLQ9P2B4 639 aa7.35□□□□□ -1.23
RTN4-214ENST00000486085 XPR1Q9UBH6 696 aa7.35□□□□□ -1.23
RTN4-214ENST00000486085 AFF4Q9UHB7 1163 aaKnown RBP7.35□□□□□ -1.23
RTN4-214ENST00000486085 DISP1Q96F81 1524 aa7.35□□□□□ -1.23
RTN4-214ENST00000486085 GAGE12BA1L429 117 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 GAGE12HA6NDE8 117 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 TMEM233B4DJY2 109 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 KPNA5O15131 536 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 RPL17P18621 184 aaKnown RBP7.34□□□□□ -1.23
RTN4-214ENST00000486085 NR4A1P22736 598 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 RHBDL3P58872 404 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 DGCR2P98153 550 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 IFIT5Q13325 482 aaKnown RBP7.34□□□□□ -1.23
RTN4-214ENST00000486085 RAB32Q13637 225 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 PPP1R32Q7Z5V6 425 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 Q8NA96 180 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 PSD4Q8NDX1 1056 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 SLC25A43Q8WUT9 341 aaPredicted RBP7.34□□□□□ -1.23
RTN4-214ENST00000486085 TTYH3Q9C0H2 523 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 COL20A1Q9P218 1284 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 KCNE5Q9UJ90 142 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 NOX1Q9Y5S8 564 aa7.34□□□□□ -1.23
RTN4-214ENST00000486085 TOR1BO14657 336 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 SUN1O94901 812 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 HLA-DOAP06340 250 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 KCNA2P16389 499 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 ZFP36P26651 326 aaKnown RBP7.33□□□□□ -1.24
RTN4-214ENST00000486085 PRIM2P49643 509 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 AK2P54819 239 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 RPS16P62249 146 aaKnown RBP7.33□□□□□ -1.24
RTN4-214ENST00000486085 CXADRP78310 365 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 TCF15Q12870 199 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 BOP1Q14137 746 aaKnown RBP7.33□□□□□ -1.24
RTN4-214ENST00000486085 BRD3Q15059 726 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 SLC44A4Q53GD3 710 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 TAF2Q6P1X5 1199 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 SPRED1Q7Z699 444 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 CPEB3Q8NE35 698 aaKnown RBP7.33□□□□□ -1.24
RTN4-214ENST00000486085 POC1BQ8TC44 478 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 NMD3Q96D46 503 aaKnown RBP7.33□□□□□ -1.24
RTN4-214ENST00000486085 TNIP3Q96KP6 325 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 SLC46A1Q96NT5 459 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 STRBPQ96SI9 672 aaKnown RBP7.33□□□□□ -1.24
RTN4-214ENST00000486085 GPR20Q99678 358 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 SPATA5L1Q9BVQ7 753 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 ALOXE3Q9BYJ1 711 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 ZNF518BQ9C0D4 1074 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 ZNF700Q9H0M5 742 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 SMOC2Q9H3U7 446 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 HESX1Q9UBX0 185 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 KIAA0556O60303 1618 aa7.33□□□□□ -1.24
RTN4-214ENST00000486085 ARHGAP35Q9NRY4 1499 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 TRIM43BA6NCK2 446 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 F8W8V4 182 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 ZFPL1O95159 310 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 LAG3P18627 525 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 TOB1P50616 345 aaPredicted RBP7.32□□□□□ -1.24
RTN4-214ENST00000486085 ALDH5A1P51649 535 aaPredicted RBP7.32□□□□□ -1.24
RTN4-214ENST00000486085 MC2RQ01718 297 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 FPGSQ05932 587 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 BEAN1Q3B7T3 259 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 CD300EQ496F6 205 aaPredicted RBP7.32□□□□□ -1.24
RTN4-214ENST00000486085 LONRF3Q496Y0 759 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 CLNKQ7Z7G1 428 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 MICU3Q86XE3 530 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 KRTAP1-3Q8IUG1 177 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 FAM9AQ8IZU1 332 aaPredicted RBP7.32□□□□□ -1.24
RTN4-214ENST00000486085 CACTINQ8WUQ7 758 aaKnown RBP7.32□□□□□ -1.24
RTN4-214ENST00000486085 NACC2Q96BF6 587 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 TRIM43Q96BQ3 446 aaPredicted RBP7.32□□□□□ -1.24
RTN4-214ENST00000486085 MPHOSPH6Q99547 160 aaKnown RBP7.32□□□□□ -1.24
RTN4-214ENST00000486085 MYD88Q99836 296 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 NEU2Q9Y3R4 380 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 RAD54BQ9Y620 910 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 CEP162Q5TB80 1403 aa7.32□□□□□ -1.24
RTN4-214ENST00000486085 ARID1BQ8NFD5 2236 aaPredicted RBP7.31□□□□□ -1.24
RTN4-214ENST00000486085 A0A087WWL8 130 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 UNC119BA6NIH7 251 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 B8ZZF3 427 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 FOXN3O00409 490 aaPredicted RBP7.31□□□□□ -1.24
RTN4-214ENST00000486085 PEX14O75381 377 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 DDX6P26196 483 aaKnown RBP eCLIP7.31□□□□□ -1.245e-30■□□□□ 9.5
RTN4-214ENST00000486085 CASP5P51878 434 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 ZNF543Q08ER8 600 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 FOXE3Q13461 319 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 CYP2A13Q16696 494 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 GEN1Q17RS7 908 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 TIGD2Q4W5G0 525 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 LCE4AQ5TA78 99 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 SRLQ86TD4 932 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 LIX1LQ8IVB5 337 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 TMEM125Q96AQ2 219 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 ELAC2Q9BQ52 826 aaKnown RBP7.31□□□□□ -1.24
RTN4-214ENST00000486085 UNKQ9C0B0 810 aaKnown RBP7.31□□□□□ -1.24
RTN4-214ENST00000486085 MS4A7Q9GZW8 240 aaPredicted RBP7.31□□□□□ -1.24
RTN4-214ENST00000486085 PNPLA8Q9NP80 782 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 SLC2A4RGQ9NR83 387 aa7.31□□□□□ -1.24
RTN4-214ENST00000486085 CLIP1P30622 1438 aa7.3□□□□□ -1.24
RTN4-214ENST00000486085 PRAMEF33A0A0G2JMD5 474 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms