RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 ATP2A1O14983 1001 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 BANF1O75531 89 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 SKAP2O75563 359 aaPredicted RBP23.71■■□□□ 1.39
CLN5-202ENST00000485938 RAD17O75943 681 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 TBXAS1P24557 533 aaPredicted RBP23.71■■□□□ 1.39
CLN5-202ENST00000485938 MAP3K10Q02779 954 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 BLMHQ13867 455 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 SLC45A4Q5BKX6 768 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 ZNF606Q8WXB4 792 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 TMEM121Q9BTD3 319 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 CLUHO75153 1309 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 TCRBV5S1A1TA0A578 114 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 E7ENQ6 273 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 ZBED4O75132 1171 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 KRT4P19013 534 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 EPHB2P29323 1055 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 ABL2P42684 1182 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 RASSF2P50749 326 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 GEMIN4P57678 1058 aaKnown RBP23.71■■□□□ 1.39
CLN5-202ENST00000485938 OGDHQ02218 1023 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 FAM83AQ86UY5 434 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 VSIG10LQ86VR7 867 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 CCDC125Q86Z20 511 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 ANKMY2Q8IV38 441 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 ACSF2Q96CM8 615 aaPredicted RBP23.71■■□□□ 1.39
CLN5-202ENST00000485938 GPRASP2Q96D09 838 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 NAF1Q96HR8 494 aaKnown RBP23.71■■□□□ 1.39
CLN5-202ENST00000485938 RBAKQ9NYW8 714 aaPredicted RBP23.71■■□□□ 1.39
CLN5-202ENST00000485938 LRRC42Q9Y546 428 aa23.71■■□□□ 1.39
CLN5-202ENST00000485938 C2CD2LO14523 706 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 DKC1O60832 514 aaKnown RBP eCLIP23.7■■□□□ 1.38
CLN5-202ENST00000485938 ZWINTO95229 277 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 LUC7L3O95232 432 aaKnown RBP23.7■■□□□ 1.38
CLN5-202ENST00000485938 TPBGLP0DKB5 382 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 ABCD1P33897 745 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 CDKN2BP42772 138 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 ZNF132P52740 706 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 TAF1BQ53T94 588 aaPredicted RBP23.7■■□□□ 1.38
CLN5-202ENST00000485938 TFDP3Q5H9I0 405 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 ZBTB41Q5SVQ8 909 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 XRRA1Q6P2D8 792 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 NLRP9Q7RTR0 991 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 MCEEQ96PE7 176 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 RABGEF1Q9UJ41 708 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 FARP1Q9Y4F1 1045 aaPredicted RBP23.7■■□□□ 1.38
CLN5-202ENST00000485938 SGK1O00141 431 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 NDC80O14777 642 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 KCNA2P16389 499 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 PRKCEQ02156 737 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 MAPK6Q16659 721 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 HIF1AQ16665 826 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 ENDOVQ8N8Q3 282 aaKnown RBP23.7■■□□□ 1.38
CLN5-202ENST00000485938 FETUBQ9UGM5 382 aa23.7■■□□□ 1.38
CLN5-202ENST00000485938 ZBTB12Q9Y330 459 aaPredicted RBP23.7■■□□□ 1.38
CLN5-202ENST00000485938 GOLGA8SH3BPF8 625 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 GOLGA8MH3BSY2 632 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 IFNB1P01574 187 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 PSAPP07602 524 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 GLRA2P23416 452 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 CCND2P30279 289 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 WASHC2DQ5SRD0 308 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 CCDC60Q8IWA6 550 aaPredicted RBP23.69■■□□□ 1.38
CLN5-202ENST00000485938 SLC35B2Q8TB61 432 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 ZNF398Q8TD17 642 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 ZBTB45Q96K62 511 aaPredicted RBP23.69■■□□□ 1.38
CLN5-202ENST00000485938 NUDCD1Q96RS6 583 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 CGRRF1Q99675 332 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 TLE6Q9H808 572 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 NPHS2Q9NP85 383 aa23.69■■□□□ 1.38
CLN5-202ENST00000485938 ZMYND8Q9ULU4 1186 aaPredicted RBP23.69■■□□□ 1.38
CLN5-202ENST00000485938 CALB1P05937 261 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 PLCB3Q01970 1234 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 GAD2Q05329 585 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 EFTUD2Q15029 972 aaKnown RBP eCLIP23.68■■□□□ 1.38
CLN5-202ENST00000485938 PLEKHG4Q58EX7 1191 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 ZC3H12AQ5D1E8 599 aaKnown RBP23.68■■□□□ 1.38
CLN5-202ENST00000485938 DNAJC24Q6P3W2 148 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 ZNF276Q8N554 614 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 OR5B17Q8NGF7 314 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 SPDL1Q96EA4 605 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 ZFP69BQ9UJL9 534 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 CORO1CQ9ULV4 474 aaPredicted RBP23.68■■□□□ 1.38
CLN5-202ENST00000485938 MYH9P35579 1960 aaKnown RBP23.68■■□□□ 1.38
CLN5-202ENST00000485938 LRRD1A4D1F6 860 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 NR3C2P08235 984 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 ADRA1DP25100 572 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 RAD23BP54727 409 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 BAATQ14032 418 aaPredicted RBP23.68■■□□□ 1.38
CLN5-202ENST00000485938 FYB2Q5VWT5 728 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 SCARA3Q6AZY7 606 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 UBR7Q8N806 425 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 FLAD1Q8NFF5 587 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 DHRS4Q9BTZ2 278 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 LNPEPQ9UIQ6 1025 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 NUMBLQ9Y6R0 609 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 KIAA1217Q5T5P2 1943 aa23.68■■□□□ 1.38
CLN5-202ENST00000485938 CCDC189A1A4V9 331 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 TFDP1Q14186 410 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 CTC1Q2NKJ3 1217 aa23.67■■□□□ 1.38
CLN5-202ENST00000485938 CLNKQ7Z7G1 428 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms