RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ZCWPW1Q9H0M4 648 aa12.68□□□□□ -0.38
HPS4-214ENST00000485842 S1PR5Q9H228 398 aa12.68□□□□□ -0.38
HPS4-214ENST00000485842 THAP9Q9H5L6 903 aa12.68□□□□□ -0.38
HPS4-214ENST00000485842 CYP4F11Q9HBI6 524 aa12.68□□□□□ -0.38
HPS4-214ENST00000485842 APOBEC3GQ9HC16 384 aaKnown RBP12.68□□□□□ -0.38
HPS4-214ENST00000485842 MAGEC2Q9UBF1 373 aaPredicted RBP12.68□□□□□ -0.38
HPS4-214ENST00000485842 AFF4Q9UHB7 1163 aaKnown RBP12.68□□□□□ -0.38
HPS4-214ENST00000485842 NFE2L3Q9Y4A8 694 aa12.68□□□□□ -0.38
HPS4-214ENST00000485842 TCF20Q9UGU0 1960 aaKnown RBP12.68□□□□□ -0.38
HPS4-214ENST00000485842 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
HPS4-214ENST00000485842 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 CCL16O15467 120 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 TACC1O75410 805 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 SEC24AO95486 1093 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 AFPP02771 609 aaKnown RBP12.67□□□□□ -0.38
HPS4-214ENST00000485842 ATF2P15336 505 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 LMO2P25791 158 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 CDH8P55286 799 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 ITIH3Q06033 890 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 KCNH2Q12809 1159 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 NFKBIBQ15653 356 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 PUS10Q3MIT2 529 aaKnown RBP12.67□□□□□ -0.38
HPS4-214ENST00000485842 ANO6Q4KMQ2 910 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 WDR44Q5JSH3 913 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 INTS6LQ5JSJ4 861 aaKnown RBP12.67□□□□□ -0.38
HPS4-214ENST00000485842 LRRTM3Q86VH5 581 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 IRF2BP1Q8IU81 584 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 ATAD1Q8NBU5 361 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
HPS4-214ENST00000485842 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 NIF3L1Q9GZT8 377 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 SDCBP2Q9H190 292 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 ADAM7Q9H2U9 754 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 PIDD1Q9HB75 910 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 SAMSN1Q9NSI8 373 aaKnown RBP12.67□□□□□ -0.38
HPS4-214ENST00000485842 RAB20Q9NX57 234 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 ZDHHC7Q9NXF8 308 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 ABI2Q9NYB9 513 aaPredicted RBP12.67□□□□□ -0.38
HPS4-214ENST00000485842 FAM50BQ9Y247 325 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 INSL5Q9Y5Q6 135 aa12.67□□□□□ -0.38
HPS4-214ENST00000485842 A8MXQ7 604 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 KCNJ18B7U540 433 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 GABRDO14764 452 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 ATP2C2O75185 946 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 LETM1O95202 739 aaPredicted RBP12.66□□□□□ -0.38
HPS4-214ENST00000485842 VNN2O95498 520 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 LRG1P02750 347 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 CD58P19256 250 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
HPS4-214ENST00000485842 ASPAP45381 313 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 CETN1Q12798 172 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 LRMPQ12912 555 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 DUSP4Q13115 394 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 KCNJ12Q14500 433 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 CBX2Q14781 532 aaPredicted RBP12.66□□□□□ -0.38
HPS4-214ENST00000485842 TJAP1Q5JTD0 557 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 GPR149Q86SP6 731 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 TCEAL8Q8IYN2 117 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 AOPEPQ8N6M6 819 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 TTC9BQ8N6N2 239 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 CMASQ8NFW8 434 aaPredicted RBP12.66□□□□□ -0.38
HPS4-214ENST00000485842 ENOX1Q8TC92 643 aaKnown RBP12.66□□□□□ -0.38
HPS4-214ENST00000485842 ZNF707Q96C28 371 aaPredicted RBP12.66□□□□□ -0.38
HPS4-214ENST00000485842 RIPOR3Q96MK2 946 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 SEPT5Q99719 369 aaPredicted RBP12.66□□□□□ -0.38
HPS4-214ENST00000485842 PRKD2Q9BZL6 878 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 TMLHEQ9NVH6 421 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 GTF3C4Q9UKN8 822 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 CDH9Q9ULB4 789 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 SLC27A5Q9Y2P5 690 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 COQ4Q9Y3A0 265 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 YIPF1Q9Y548 306 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 NME7Q9Y5B8 376 aa12.66□□□□□ -0.38
HPS4-214ENST00000485842 PES1O00541 588 aaKnown RBP12.65□□□□□ -0.38
HPS4-214ENST00000485842 XYLBO75191 536 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 SOAT2O75908 522 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 HNRNPA1P09651 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
HPS4-214ENST00000485842 PRKCSHP14314 528 aaPredicted RBP12.65□□□□□ -0.38
HPS4-214ENST00000485842 SP100P23497 879 aaPredicted RBP12.65□□□□□ -0.38
HPS4-214ENST00000485842 HOXA9P31269 272 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 MTHFRP42898 656 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 MYL5Q02045 173 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 TWF1Q12792 350 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 ORC1Q13415 861 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 SMAD2Q15796 467 aaKnown RBP12.65□□□□□ -0.38
HPS4-214ENST00000485842 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
HPS4-214ENST00000485842 UVSSAQ2YD98 709 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 MGAT5BQ3V5L5 792 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 MDH1BQ5I0G3 518 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 ATAT1Q5SQI0 421 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 SUSD6Q92537 303 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 TATDN2Q93075 761 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 ARID3AQ99856 593 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 NAT10Q9H0A0 1025 aaKnown RBP12.65□□□□□ -0.38
HPS4-214ENST00000485842 CRISPLD1Q9H336 500 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 DPEP3Q9H4B8 488 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 POMKQ9H5K3 350 aa12.65□□□□□ -0.38
HPS4-214ENST00000485842 CRTAC1Q9NQ79 661 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms