RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PIGRP01833 764 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 NFICP08651 508 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 PSMC3P17980 439 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 CYP3A5P20815 502 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 CNR2P34972 360 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 PI4KAP42356 2102 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 LIMK1P53667 647 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 GTF2BQ00403 316 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 DUSP4Q13115 394 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 CUL4AQ13619 759 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 ACAP1Q15027 740 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 PTPAQ15257 358 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 KYAT1Q16773 422 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 WDR44Q5JSH3 913 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 SPATA1Q5VX52 437 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 ADALQ6DHV7 355 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 Q6ZS52 159 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 SFR1Q86XK3 245 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 SPEM1Q8N4L4 309 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
HMGN1-215ENST00000485550 BEST2Q8NFU1 509 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 ASB16Q96NS5 453 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 TMEM209Q96SK2 561 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 CCSER1Q9C0I3 900 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 CRISPLD1Q9H336 500 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 SMOC1Q9H4F8 434 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-215ENST00000485550 TBC1D7Q9P0N9 293 aa11.46□□□□□ -0.57
HMGN1-215ENST00000485550 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
HMGN1-215ENST00000485550 LAMA1P25391 3075 aa11.46□□□□□ -0.58
HMGN1-215ENST00000485550 PCNX2A6NKB5 2137 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 DENND4CQ5VZ89 1909 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 MYO16Q9Y6X6 1858 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 ZNF197O14709 1029 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 ZNF263O14978 683 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 FOXD2O60548 495 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-215ENST00000485550 MOSPD3O75425 235 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 SOAT2O75908 522 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 OAZ2O95190 189 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 KCNK5O95279 499 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 SYT1P21579 422 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 VIPR2P41587 438 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 SOX9P48436 509 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 LILRA4P59901 499 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 RESTQ13127 1097 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 ARSIQ5FYB1 569 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 STPG1Q5TH74 334 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 OVOS1Q6IE37 1185 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 UNQ6494/PRO21346Q6UXR6 183 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 ATAD1Q8NBU5 361 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 KCNN1Q92952 543 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 SENP8Q96LD8 212 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 CCDC39Q9UFE4 941 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 FBXO2Q9UK22 296 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-215ENST00000485550 YIPF1Q9Y548 306 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 PKD1L2Q7Z442 2459 aa11.45□□□□□ -0.58
HMGN1-215ENST00000485550 GON4LQ3T8J9 2241 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 MYMKA6NI61 221 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 SLC38A8A6NNN8 435 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 ADRB2P07550 413 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 ZNF806P0C7X5 589 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 PDCP20941 246 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 AARSP49588 968 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGN1-215ENST00000485550 KCNA1Q09470 495 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 GPR17Q13304 367 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 TMEM132DQ14C87 1099 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 TEAD2Q15562 447 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 RRAGBQ5VZM2 374 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 C9orf57Q5W0N0 161 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 PSAPL1Q6NUJ1 521 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 ARMCX5Q6P1M9 558 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 ZNF720Q7Z2F6 126 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 CD302Q8IX05 232 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 TTC9BQ8N6N2 239 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 TTC8Q8TAM2 541 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 CSGALNACT1Q8TDX6 532 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 DEPDC1BQ8WUY9 529 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 SMARCD2Q92925 531 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 SLITRK6Q9H5Y7 841 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 TRPV5Q9NQA5 729 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 ASAH2Q9NR71 780 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 AGO2Q9UKV8 859 aaKnown RBP11.44□□□□□ -0.58
HMGN1-215ENST00000485550 SRPRBQ9Y5M8 271 aaKnown RBP11.44□□□□□ -0.58
HMGN1-215ENST00000485550 SPEGQ15772 3267 aa11.44□□□□□ -0.58
HMGN1-215ENST00000485550 AKAP13Q12802 2813 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 A0A1W2PRU2 124 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 MTMR11A4FU01 709 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 OR6C75A6NL08 312 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 HEPACAM2A8MVW5 462 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 PIRO00625 290 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 CYB561D2O14569 222 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 PAPSS2O95340 614 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-215ENST00000485550 ODC1P11926 461 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 IDEP14735 1019 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 TYMPP19971 482 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 SPINK2P20155 84 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 SCP2P22307 547 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 ALDH1A3P47895 512 aa11.43□□□□□ -0.58
HMGN1-215ENST00000485550 PXNP49023 591 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms