RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 FBXO47Q5MNV8 452 aa11.82□□□□□ -0.52
PEX1-208ENST00000484913 PCSK9Q8NBP7 692 aaKnown RBP11.82□□□□□ -0.52
PEX1-208ENST00000484913 ARRDC4Q8NCT1 418 aa11.82□□□□□ -0.52
PEX1-208ENST00000484913 APPL2Q8NEU8 664 aa11.82□□□□□ -0.52
PEX1-208ENST00000484913 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.82□□□□□ -0.528e-8■■■□□ 15.1
PEX1-208ENST00000484913 MRPL47Q9HD33 250 aaKnown RBP11.82□□□□□ -0.52
PEX1-208ENST00000484913 ASIC3Q9UHC3 531 aa11.82□□□□□ -0.52
PEX1-208ENST00000484913 DDX20Q9UHI6 824 aaKnown RBP11.82□□□□□ -0.52
PEX1-208ENST00000484913 MYO9BQ13459 2157 aa11.82□□□□□ -0.52
PEX1-208ENST00000484913 F8VP50 259 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 CLDN5O00501 218 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 XPOTO43592 962 aaKnown RBP11.81□□□□□ -0.52
PEX1-208ENST00000484913 ATP2C2O75185 946 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 MYBL2P10244 700 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 PYGMP11217 842 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 KRT3P12035 628 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 GZMAP12544 262 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 PROZP22891 400 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 CCL23P55773 120 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 MAP9Q49MG5 647 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 MSANTD4Q8NCY6 345 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 C18orf8Q96DM3 657 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 SENP6Q9GZR1 1112 aaPredicted RBP11.81□□□□□ -0.52
PEX1-208ENST00000484913 XYLT2Q9H1B5 865 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 TULP2O00295 520 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 SART1O43290 800 aaKnown RBP11.81□□□□□ -0.52
PEX1-208ENST00000484913 GNL1P36915 607 aaPredicted RBP11.81□□□□□ -0.52
PEX1-208ENST00000484913 CETN2P41208 172 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 ABI1Q8IZP0 508 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 LRRC57Q8N9N7 239 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 USP38Q8NB14 1042 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 DDX1Q92499 740 aaKnown RBP11.81□□□□□ -0.52
PEX1-208ENST00000484913 NDRG1Q92597 394 aaKnown RBP11.81□□□□□ -0.52
PEX1-208ENST00000484913 USP6NLQ92738 828 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 PBKQ96KB5 322 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 ISCUQ9H1K1 167 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 FAM105AQ9NUU6 356 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 SNX24Q9Y343 169 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 TCRBV7S2A1N4TA0A589 114 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 FKTNO75072 461 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 LMO2P25791 158 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 CARSP49589 748 aaKnown RBP11.81□□□□□ -0.52
PEX1-208ENST00000484913 NUMBP49757 651 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 ACLYP53396 1101 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 SOX4Q06945 474 aaPredicted RBP11.81□□□□□ -0.52
PEX1-208ENST00000484913 SYCP2LQ5T4T6 812 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 MTUS1Q9ULD2 1270 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 ARID2Q68CP9 1835 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 A0A0G2JMZ2 1700 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 CYB561D2O14569 222 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 TCF4P15884 667 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 TAF6P49848 677 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 WSCD1Q658N2 575 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 SCUBE3Q8IX30 993 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 ZSWIM1Q9BR11 485 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 B3GNT5Q9BYG0 378 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 STIM2Q9P246 746 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 ITGA11Q9UKX5 1188 aa11.81□□□□□ -0.52
PEX1-208ENST00000484913 GLI1P08151 1106 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 ANXA13P27216 316 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 RAD23BP54727 409 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 GJA9P57773 515 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 GPS2Q13227 327 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 MTFR1Q15390 333 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 PTPN20Q4JDL3 420 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 PPP6R3Q5H9R7 873 aaPredicted RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 PPP1R26Q5T8A7 1209 aaPredicted RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 MTERF4Q7Z6M4 381 aaKnown RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 UBLCP1Q8WVY7 318 aaPredicted RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 SNX27Q96L92 541 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 FAM193BQ96PV7 902 aaPredicted RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 PAAF1Q9BRP4 392 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 PLVAPQ9BX97 442 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 ZCCHC17Q9NP64 241 aaKnown RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 PRDM5Q9NQX1 630 aaPredicted RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 PARVAQ9NVD7 372 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 GPATCH2LQ9NWQ4 482 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 INTUQ9ULD6 942 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 KPNA7A9QM74 516 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 E5RJQ4 531 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 MEFVO15553 781 aaPredicted RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 DAPK3O43293 454 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 CHRNA1P02708 482 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 CAPN12Q6ZSI9 719 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 JOSD2Q8TAC2 188 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 RIN2Q8WYP3 895 aaPredicted RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 TRIM11Q96F44 468 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 CPXM1Q96SM3 734 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 ZNF446Q9NWS9 450 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 CEP290O15078 2479 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 F5H423 210 aaPredicted RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 CALB1P05937 261 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 THP07101 528 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 BRCC3P46736 316 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 OR1G1P47890 313 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 PLTPP55058 493 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 CDC42EP1Q00587 391 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 SPOUT1Q5T280 376 aaKnown RBP11.8□□□□□ -0.52
PEX1-208ENST00000484913 ADGRF2Q8IZF7 708 aa11.8□□□□□ -0.52
PEX1-208ENST00000484913 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms