RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 GNAI1P63096 354 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 EIF2B5Q13144 721 aaKnown RBP5.75□□□□□ -1.49
SCAF11-207ENST00000484275 KIF22Q14807 665 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 TBCCQ15814 346 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 MTX3Q5HYI7 312 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 ZNF626Q68DY1 528 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 ZNF66Q6ZN08 573 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 C9orf106Q8NAJ2 232 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 REPS1Q96D71 796 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 CNPPD1Q9BV87 410 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 CFAP97Q9P2B7 532 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 PCDHA3Q9Y5H8 950 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCAF11-207ENST00000484275 TNKSO95271 1327 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 PPM1DO15297 605 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 CHEK2O96017 543 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 PIK3CGP48736 1102 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 SLC10A2Q12908 348 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-207ENST00000484275 GRM1Q13255 1194 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 EFCAB2Q5VUJ9 269 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 BHLHA9Q7RTU4 235 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 PNMA8AQ86V59 439 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-207ENST00000484275 ZNF366Q8N895 744 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 KLHDC4Q8TBB5 520 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 FAM136AQ96C01 138 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 TINAGL1Q9GZM7 467 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-207ENST00000484275 KAT6AQ92794 2004 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 ZNF804BA4D1E1 1349 aa5.74□□□□□ -1.49
SCAF11-207ENST00000484275 RPLP2P05387 115 aaKnown RBP5.73□□□□□ -1.49
SCAF11-207ENST00000484275 PRR35P0CG20 571 aa5.73□□□□□ -1.49
SCAF11-207ENST00000484275 RARBP10826 455 aa5.73□□□□□ -1.49
SCAF11-207ENST00000484275 SMARCA1P28370 1054 aa5.73□□□□□ -1.49
SCAF11-207ENST00000484275 CD6P30203 668 aa5.73□□□□□ -1.49
SCAF11-207ENST00000484275 BMPR2Q13873 1038 aa5.73□□□□□ -1.49
SCAF11-207ENST00000484275 FAM50AQ14320 339 aaKnown RBP5.73□□□□□ -1.49
SCAF11-207ENST00000484275 PROSER3Q2NL68 480 aa5.73□□□□□ -1.49
SCAF11-207ENST00000484275 SUMO4Q6EEV6 95 aa5.73□□□□□ -1.49
SCAF11-207ENST00000484275 ZNF551Q7Z340 670 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-207ENST00000484275 C3orf20Q8ND61 904 aa5.73□□□□□ -1.49
SCAF11-207ENST00000484275 GNL3LQ9NVN8 582 aaKnown RBP5.73□□□□□ -1.49
SCAF11-207ENST00000484275 ITGALP20701 1170 aa5.72□□□□□ -1.49
SCAF11-207ENST00000484275 EVA1CP58658 441 aa5.72□□□□□ -1.49
SCAF11-207ENST00000484275 SP2Q02086 613 aa5.72□□□□□ -1.49
SCAF11-207ENST00000484275 KLF9Q13886 244 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-207ENST00000484275 C11orf87Q6NUJ2 197 aa5.72□□□□□ -1.49
SCAF11-207ENST00000484275 USP37Q86T82 979 aa5.72□□□□□ -1.49
SCAF11-207ENST00000484275 SLC13A1Q9BZW2 595 aa5.72□□□□□ -1.49
SCAF11-207ENST00000484275 ARHGEF3Q9NR81 526 aa5.72□□□□□ -1.49
SCAF11-207ENST00000484275 RAD54BQ9Y620 910 aa5.72□□□□□ -1.49
SCAF11-207ENST00000484275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 TISP43B9A030 160 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 MPGP29372 298 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 GCLCP48506 637 aaPredicted RBP5.71□□□□□ -1.5
SCAF11-207ENST00000484275 ZNF134P52741 427 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 AMPD3Q01432 767 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 NOGQ13253 232 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 PTPN21Q16825 1174 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 PLAC9Q5JTB6 97 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 MAVSQ7Z434 540 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 TNPO1Q92973 898 aaKnown RBP5.71□□□□□ -1.5
SCAF11-207ENST00000484275 SH2D3AQ9BRG2 576 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 MRPL46Q9H2W6 279 aaKnown RBP5.71□□□□□ -1.5
SCAF11-207ENST00000484275 ABCF2Q9UG63 623 aa5.71□□□□□ -1.5
SCAF11-207ENST00000484275 H0YIZ8 118 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 SOAT2O75908 522 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 AHSGP02765 367 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 FTH1P19P0C7X4 201 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 KELP23276 732 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 LIPAP38571 399 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 HK3P52790 923 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 SLC44A4Q53GD3 710 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 CEP85Q6P2H3 762 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 HEATR3Q7Z4Q2 680 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 PPP1R3BQ86XI6 285 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCAF11-207ENST00000484275 PRPF38AQ8NAV1 312 aaKnown RBP5.7□□□□□ -1.5
SCAF11-207ENST00000484275 ATRIPQ8WXE1 791 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 SH3BP4Q9P0V3 963 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 POLHQ9Y253 713 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 BTBD3Q9Y2F9 522 aa5.7□□□□□ -1.5
SCAF11-207ENST00000484275 PROB1E7EW31 1015 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 M0QYG6 137 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 DCLK1O15075 740 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 FAM163BP0C2L3 166 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 NDUFB7P17568 137 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 PDCP20941 246 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 EPHB2P29323 1055 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 CLCN2P51788 898 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 ETFDHQ16134 617 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 TMEM108Q6UXF1 575 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 NEK8Q86SG6 692 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 PRR18Q8N4B5 295 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 FAM46DQ8NEK8 389 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 QTRT1Q9BXR0 403 aaKnown RBP5.69□□□□□ -1.5
SCAF11-207ENST00000484275 DLL3Q9NYJ7 618 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 ZDHHC8Q9ULC8 765 aa5.69□□□□□ -1.5
SCAF11-207ENST00000484275 JTBO76095 146 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 NXPH3O95157 252 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 SUPT20HL1Q3ZLR7 823 aa5.68□□□□□ -1.5
SCAF11-207ENST00000484275 CEP78Q5JTW2 689 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms