RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 FRRS1LQ9P0K9 344 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 MUTYHQ9UIF7 546 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 DCTN4Q9UJW0 460 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 SORCS3Q9UPU3 1222 aa6.73□□□□□ -1.33
PTCD3-215ENST00000484203 A0A087WWV3 80 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 VPS37CA5D8V6 355 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-215ENST00000484203 TMEM221A6NGB7 291 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 H7C4K7 107 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 M0R296 226 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 SYN3O14994 580 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 KRT18P05783 430 aaKnown RBP6.72□□□□□ -1.33
PTCD3-215ENST00000484203 KCNE1P15382 129 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 EPCAMP16422 314 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 DDIT3P35638 169 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 PLA2G5P39877 138 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 SLC12A3P55017 1021 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 NOLC1Q14978 699 aaKnown RBP eCLIP6.72□□□□□ -1.33
PTCD3-215ENST00000484203 IL17AQ16552 155 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 TMEM119Q4V9L6 283 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 XKR4Q5GH76 650 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 NT5DC1Q5TFE4 455 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 SLFN12LQ6IEE8 588 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 TMC5Q6UXY8 1006 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 CCDC73Q6ZRK6 1079 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 DAW1Q8N136 415 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 TMEM161BQ8NDZ6 487 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 APPL2Q8NEU8 664 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 RIN2Q8WYP3 895 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-215ENST00000484203 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 BICD1Q96G01 975 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 PPP1R10Q96QC0 940 aaKnown RBP6.72□□□□□ -1.33
PTCD3-215ENST00000484203 RUSC1Q9BVN2 902 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 VN1R3Q9BXE9 311 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 BACH2Q9BYV9 841 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 PIDD1Q9HB75 910 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 PTPRHQ9HD43 1115 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 MAN1C1Q9NR34 630 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 MIOSQ9NXC5 875 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 IGSF9Q9P2J2 1179 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 SEL1LQ9UBV2 794 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 GDAQ9Y2T3 454 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 BACE2Q9Y5Z0 518 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 CACNA1HO95180 2353 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 ZDBF2Q9HCK1 2354 aa6.72□□□□□ -1.33
PTCD3-215ENST00000484203 RALGAPA2Q2PPJ7 1873 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 DOCK5Q9H7D0 1870 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 LOC100996750A0A140TA64 210 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 SMIM28A0A1B0GU29 152 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 CCDC195A0A1B0GUA6 201 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 CASTOR2A6NHX0 329 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 PP2D1A8MPX8 630 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 RBAK-RBAKDNI3L0D1 243 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 K7ELQ4 463 aaPredicted RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 PTGESO14684 152 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 EREGO14944 169 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 HNRNPDLO14979 420 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 SLC16A4O15374 487 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 B4GALT3O60512 393 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 KIF4AO95239 1232 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 PIGRP01833 764 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 HSP90AA1P07900 732 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 CYP3A5P20815 502 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 PROZP22891 400 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 CDC25AP30304 524 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 LIG4P49917 911 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF131P52739 623 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 RBM10P98175 930 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 MCL1Q07820 350 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 MAPK7Q13164 816 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 ALCAMQ13740 583 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 RAB33AQ14088 237 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 POSTNQ15063 836 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 SF3A1Q15459 793 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 PSMD5Q16401 504 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 UPP1Q16831 310 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 FAM171A1Q5VUB5 890 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 ATL3Q6DD88 541 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 ALKAL1Q6UXT8 129 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 STXBP4Q6ZWJ1 553 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 HAUS6Q7Z4H7 955 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 GPBP1Q86WP2 473 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 CDR2LQ86X02 465 aaPredicted RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 CEP57Q86XR8 500 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 MYCT1Q8N699 235 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 KREMEN2Q8NCW0 462 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 AUTS2Q8WXX7 1259 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 SMG7Q92540 1137 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 LARP4BQ92615 738 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 SNX21Q969T3 373 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 HVCN1Q96D96 273 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 TRIM11Q96F44 468 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 SNX27Q96L92 541 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 ZNF396Q96N95 335 aaPredicted RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 FAM129BQ96TA1 746 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 KIFC3Q9BVG8 833 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 TARS2Q9BW92 718 aaKnown RBP6.71□□□□□ -1.34
PTCD3-215ENST00000484203 RBCK1Q9BYM8 510 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 GPR62Q9BZJ7 368 aa6.71□□□□□ -1.34
PTCD3-215ENST00000484203 CDT1Q9H211 546 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms