RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 GRIK3Q13003 919 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 COASYQ13057 564 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 PSMD2Q13200 908 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 ZC2HC1CQ53FD0 456 aaPredicted RBP9.71□□□□□ -0.86
COL8A1-207ENST00000483969 L1TD1Q5T7N2 865 aaKnown RBP9.71□□□□□ -0.86
COL8A1-207ENST00000483969 SYCP3Q8IZU3 236 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 TTC16Q8NEE8 873 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 MAFAQ8NHW3 353 aaPredicted RBP9.71□□□□□ -0.86
COL8A1-207ENST00000483969 MICAL1Q8TDZ2 1067 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 GDPD5Q8WTR4 605 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 POF1BQ8WVV4 589 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 PPP2R3CQ969Q6 453 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 TMEM169Q96HH4 297 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 ZBTB45Q96K62 511 aaPredicted RBP9.71□□□□□ -0.86
COL8A1-207ENST00000483969 IPO9Q96P70 1041 aaKnown RBP9.71□□□□□ -0.86
COL8A1-207ENST00000483969 COLEC11Q9BWP8 271 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 STRA6Q9BX79 667 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 BLZF1Q9H2G9 400 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 ALG13Q9NP73 1137 aaKnown RBP9.71□□□□□ -0.86
COL8A1-207ENST00000483969 MIOSQ9NXC5 875 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 TBC1D7Q9P0N9 293 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 ANKFY1Q9P2R3 1169 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 SEPT3Q9UH03 358 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 HOOK1Q9UJC3 728 aaKnown RBP9.71□□□□□ -0.86
COL8A1-207ENST00000483969 LZTS1Q9Y250 596 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 SCN5AQ14524 2016 aa9.71□□□□□ -0.86
COL8A1-207ENST00000483969 HMX2A2RU54 273 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 NRP1O14786 923 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 OGTO15294 1046 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 GRM6O15303 877 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 DDX3YO15523 660 aaKnown RBP9.7□□□□□ -0.86
COL8A1-207ENST00000483969 ZC3H11AO75152 810 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL8A1-207ENST00000483969 RECQL4O94761 1208 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 ITGB1P05556 798 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 CLTAP09496 248 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 HARSP12081 509 aaKnown RBP9.7□□□□□ -0.86
COL8A1-207ENST00000483969 OR1G1P47890 313 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 GP2P55259 537 aaKnown RBP9.7□□□□□ -0.86
COL8A1-207ENST00000483969 OSTNP61366 133 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 CUL4BQ13620 913 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 NOLC1Q14978 699 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL8A1-207ENST00000483969 CCDC85BQ15834 202 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-207ENST00000483969 TIGD5Q53EQ6 642 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 FAM26FQ5R3K3 315 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 FDX2Q6P4F2 183 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 KRBA2Q6ZNG9 492 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 ATCAYQ86WG3 371 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 ZNF280BQ86YH2 543 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 SLC39A11Q8N1S5 342 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 PPM1EQ8WY54 764 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 EDEM1Q92611 657 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-207ENST00000483969 TSPAN18Q96SJ8 248 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 FAM83CQ9BQN1 747 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 ZMYND15Q9H091 742 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 PLEKHA5Q9HAU0 1116 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 CNTN3Q9P232 1028 aa9.7□□□□□ -0.86
COL8A1-207ENST00000483969 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-207ENST00000483969 A0A0B4J269 797 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 NT5C1B-RDH14C9J2C7 533 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 ANKRD63C9JTQ0 380 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 ABLIM1O14639 778 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 CEP290O15078 2479 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 EIF3DO15371 548 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 NCK2O43639 380 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 PRPF6O94906 941 aaKnown RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 KIF20AO95235 890 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 LDHAP00338 332 aaKnown RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 MYBP10242 640 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 MYH9P35579 1960 aaKnown RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 SLC11A1P49279 550 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 SNRPFP62306 86 aaKnown RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 POU5F1Q01860 360 aaKnown RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 TUSC3Q13454 348 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 COL4A6Q14031 1691 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 HSP90AA2PQ14568 343 aaPredicted RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 XKR4Q5GH76 650 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 TMC7Q7Z402 723 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 CD302Q8IX05 232 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 COLGALT2Q8IYK4 626 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 GSTCDQ8NEC7 633 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 ZNF507Q8TCN5 953 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 POMGNT1Q8WZA1 660 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 KAT6AQ92794 2004 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 PMEPA1Q969W9 287 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 IGSF21Q96ID5 467 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 TIGD1Q96MW7 591 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 MSTO1Q9BUK6 570 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 GOLPH3LQ9H4A5 285 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 NSUN3Q9H649 340 aaKnown RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 RPF1Q9H9Y2 349 aaKnown RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 NGRNQ9NPE2 291 aaKnown RBP9.69□□□□□ -0.86
COL8A1-207ENST00000483969 EXOC1Q9NV70 894 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 SLC38A7Q9NVC3 462 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 DZANK1Q9NVP4 752 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 DNAJB4Q9UDY4 337 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 STYXL1Q9Y6J8 313 aa9.69□□□□□ -0.86
COL8A1-207ENST00000483969 SMIM28A0A1B0GU29 152 aa9.68□□□□□ -0.86
COL8A1-207ENST00000483969 PDE2AO00408 941 aaPredicted RBP9.68□□□□□ -0.86
COL8A1-207ENST00000483969 KIAA0391O15091 583 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms