RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PROS1P07225 676 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 SPINK2P20155 84 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 MPLP40238 635 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 TRAPPC10P48553 1259 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 MCM2P49736 904 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 SLC12A3P55017 1021 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 NCKAP1LP55160 1127 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 PLCB2Q00722 1185 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 STRN3Q13033 797 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 SLC39A12Q504Y0 691 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 HYIQ5T013 277 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 C9orf57Q5W0N0 161 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 JADE1Q6IE81 842 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 PSAPL1Q6NUJ1 521 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 HHIPQ96QV1 700 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 TMLHEQ9NVH6 421 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 TSC2P49815 1807 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 DMXL2Q8TDJ6 3036 aa13.98□□□□□ -0.17
UBR4-213ENST00000483922 ANK1P16157 1881 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 NFICP08651 508 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 GPR15P49685 360 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 KRT79Q5XKE5 535 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 TXNDC8Q6A555 127 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 HAUS6Q7Z4H7 955 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 ITIH5Q86UX2 942 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 MAB21L3Q8N8X9 362 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 FAM200AQ8TCP9 573 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 KCNN1Q92952 543 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 SEPT5Q99719 369 aaPredicted RBP13.97□□□□□ -0.17
UBR4-213ENST00000483922 IKZF4Q9H2S9 585 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.97□□□□□ -0.17
UBR4-213ENST00000483922 VPS45Q9NRW7 570 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 CPSF3Q9UKF6 684 aaKnown RBP13.97□□□□□ -0.17
UBR4-213ENST00000483922 TBX20Q9UMR3 447 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 SLC8A2Q9UPR5 921 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 PCDHGA5Q9Y5G8 931 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 IGF2RP11717 2491 aa13.97□□□□□ -0.17
UBR4-213ENST00000483922 ATRXP46100 2492 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 C4orf47A7E2U8 309 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 TISP43B9A030 160 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 ANKRD63C9JTQ0 380 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 AKAP3O75969 853 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 FGF19O95750 216 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 CCDC192P0DO97 292 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 HAPLN1P10915 354 aaPredicted RBP13.96□□□□□ -0.17
UBR4-213ENST00000483922 TUFMP49411 452 aaKnown RBP13.96□□□□□ -0.17
UBR4-213ENST00000483922 NLRP12P59046 1061 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 GRSF1Q12849 480 aaKnown RBP eCLIP13.96□□□□□ -0.17
UBR4-213ENST00000483922 MGAT5BQ3V5L5 792 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 ARHGAP15Q53QZ3 475 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 ARMCX5Q6P1M9 558 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 CAMKK1Q8N5S9 505 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 FIZ1Q96SL8 496 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 TIPINQ9BVW5 301 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 ZMIZ1Q9ULJ6 1067 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 INVSQ9Y283 1065 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 SPAG17Q6Q759 2223 aa13.96□□□□□ -0.17
UBR4-213ENST00000483922 DSPP15924 2871 aaKnown RBP13.96□□□□□ -0.18
UBR4-213ENST00000483922 A0A0B4J269 797 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 CDX4O14627 284 aaPredicted RBP13.95□□□□□ -0.18
UBR4-213ENST00000483922 OGTO15294 1046 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 TADA3O75528 432 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 PIGRP01833 764 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 PLA2G4BP0C869 781 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 GJA4P35212 333 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 PRPHP41219 470 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 PPP2R3AQ06190 1150 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
UBR4-213ENST00000483922 SDHAF4Q5VUM1 108 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 WSCD1Q658N2 575 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 RNF43Q68DV7 783 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 SLC22A12Q96S37 553 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 CYP2S1Q96SQ9 504 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 LLPHQ9BRT6 129 aaKnown RBP13.95□□□□□ -0.18
UBR4-213ENST00000483922 THG1LQ9NWX6 298 aaKnown RBP13.95□□□□□ -0.18
UBR4-213ENST00000483922 LIMCH1Q9UPQ0 1083 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 SCN1AP35498 2009 aa13.95□□□□□ -0.18
UBR4-213ENST00000483922 DENND4CQ5VZ89 1909 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 LNP1A1A4G5 178 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 BCLAF3A2AJT9 711 aaKnown RBP13.94□□□□□ -0.18
UBR4-213ENST00000483922 PATE3B3GLJ2 98 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 CYB561D2O14569 222 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 ATG13O75143 517 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 ODC1P11926 461 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 CDC25CP30307 473 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 MATR3P43243 847 aaKnown RBP eCLIP13.94□□□□□ -0.18
UBR4-213ENST00000483922 SMTNP53814 917 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 WNT7BP56706 349 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 COL9A2Q14055 689 aaPredicted RBP13.94□□□□□ -0.18
UBR4-213ENST00000483922 ITPR1Q14643 2758 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 CCDC142Q17RM4 750 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 TMEM119Q4V9L6 283 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 CRELD2Q6UXH1 353 aaPredicted RBP13.94□□□□□ -0.18
UBR4-213ENST00000483922 UNQ6494/PRO21346Q6UXR6 183 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 KDF1Q8NAX2 398 aaPredicted RBP13.94□□□□□ -0.18
UBR4-213ENST00000483922 RPLP0P6Q8NHW5 317 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 FAM212AQ96EL1 285 aa13.94□□□□□ -0.18
UBR4-213ENST00000483922 RPF1Q9H9Y2 349 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms