RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SLC1A1P43005 524 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 TAF6P49848 677 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 SGO2Q562F6 1265 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 TWNKQ96RR1 684 aa27.85■■■□□ 2.05
SHOX2-204ENST00000483851 ARVCFO00192 962 aa27.84■■■□□ 2.05
SHOX2-204ENST00000483851 TAP1Q03518 808 aa27.84■■■□□ 2.05
SHOX2-204ENST00000483851 CCDC70Q6NSX1 233 aa27.84■■■□□ 2.05
SHOX2-204ENST00000483851 MMS22LQ6ZRQ5 1243 aa27.84■■■□□ 2.05
SHOX2-204ENST00000483851 DPH6Q7L8W6 267 aa27.84■■■□□ 2.05
SHOX2-204ENST00000483851 UBN1Q9NPG3 1134 aa27.84■■■□□ 2.05
SHOX2-204ENST00000483851 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.84■■■□□ 2.05
SHOX2-204ENST00000483851 A0A0U1RQF3 1178 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 KPNA7A9QM74 516 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 PPEF2O14830 753 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 GHRP10912 638 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 ZNF618Q5T7W0 954 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 LIMS2Q7Z4I7 341 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 ERICH1Q86X53 443 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 WDTC1Q8N5D0 677 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 C1orf131Q8NDD1 294 aaKnown RBP27.83■■■□□ 2.05
SHOX2-204ENST00000483851 HEXIM2Q96MH2 286 aaKnown RBP27.83■■■□□ 2.05
SHOX2-204ENST00000483851 ANAPC7Q9UJX3 599 aa27.83■■■□□ 2.05
SHOX2-204ENST00000483851 CCDC66A2RUB6 948 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 MYO1FO00160 1098 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 COMTP21964 271 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 CTNNA2P26232 953 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 DNA2P51530 1060 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 MAMLD1Q13495 774 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 CD101Q93033 1021 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 PGBD4Q96DM1 585 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 HMGXB4Q9UGU5 601 aa27.83■■■□□ 2.04
SHOX2-204ENST00000483851 O00370 1275 aa27.82■■■□□ 2.04
SHOX2-204ENST00000483851 DNM1LO00429 736 aa27.82■■■□□ 2.04
SHOX2-204ENST00000483851 CKBP12277 381 aa27.82■■■□□ 2.04
SHOX2-204ENST00000483851 GSCP56915 257 aaPredicted RBP27.82■■■□□ 2.04
SHOX2-204ENST00000483851 TERF2Q15554 542 aa27.82■■■□□ 2.04
SHOX2-204ENST00000483851 MS4A14Q96JA4 679 aa27.82■■■□□ 2.04
SHOX2-204ENST00000483851 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.82■■■□□ 2.041e-6■□□□□ 9.9
SHOX2-204ENST00000483851 PGRMC1O00264 195 aaKnown RBP27.81■■■□□ 2.04
SHOX2-204ENST00000483851 CEP104O60308 925 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 THP07101 528 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 SOX4Q06945 474 aaPredicted RBP27.81■■■□□ 2.04
SHOX2-204ENST00000483851 LCLAT1Q6UWP7 414 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 HDXQ7Z353 690 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 RUBCNQ92622 972 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 WDR35Q9P2L0 1181 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 CHORDC1Q9UHD1 332 aaPredicted RBP27.81■■■□□ 2.04
SHOX2-204ENST00000483851 PTPN22Q9Y2R2 807 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 FAM170AA1A519 330 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 CAPN15O75808 1086 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 MCM3P25205 808 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 SOWAHAQ2M3V2 549 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 GLE1Q53GS7 698 aaKnown RBP27.81■■■□□ 2.04
SHOX2-204ENST00000483851 DENND1BQ6P3S1 775 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 GSTCDQ8NEC7 633 aa27.81■■■□□ 2.04
SHOX2-204ENST00000483851 NAP1L3Q99457 506 aaPredicted RBP27.81■■■□□ 2.04
SHOX2-204ENST00000483851 PAK6Q9NQU5 681 aaPredicted RBP27.81■■■□□ 2.04
SHOX2-204ENST00000483851 SPOPO43791 374 aa27.8■■■□□ 2.04
SHOX2-204ENST00000483851 SSTR3P32745 418 aaPredicted RBP27.8■■■□□ 2.04
SHOX2-204ENST00000483851 CTNNA1P35221 906 aaKnown RBP27.8■■■□□ 2.04
SHOX2-204ENST00000483851 AGMOQ6ZNB7 445 aa27.8■■■□□ 2.04
SHOX2-204ENST00000483851 TOP6BLQ8N6T0 577 aa27.8■■■□□ 2.04
SHOX2-204ENST00000483851 FEZF2Q8TBJ5 459 aa27.8■■■□□ 2.04
SHOX2-204ENST00000483851 MRPL45Q9BRJ2 306 aaKnown RBP27.8■■■□□ 2.04
SHOX2-204ENST00000483851 MIS12Q9H081 205 aa27.8■■■□□ 2.04
SHOX2-204ENST00000483851 TRPV6Q9H1D0 765 aa27.8■■■□□ 2.04
SHOX2-204ENST00000483851 TMEM59LQ9UK28 342 aa27.8■■■□□ 2.04
SHOX2-204ENST00000483851 PCDHA3Q9Y5H8 950 aa27.8■■■□□ 2.04
SHOX2-204ENST00000483851 TCRBV5S1A1TA0A578 114 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 MICAL2O94851 1124 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 MAN1A1P33908 653 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 CDK7P50613 346 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 LILRA4P59901 499 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 FAM193AP78312 1265 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 SMC1AQ14683 1233 aaKnown RBP27.79■■■□□ 2.04
SHOX2-204ENST00000483851 TRAF7Q6Q0C0 670 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 C3orf20Q8ND61 904 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 ZFP42Q96MM3 310 aa27.79■■■□□ 2.04
SHOX2-204ENST00000483851 TSPYL2Q9H2G4 693 aaPredicted RBP27.79■■■□□ 2.04
SHOX2-204ENST00000483851 TMEM110-MUSTN1A8MSY1 372 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 PROSCO94903 275 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 RPL9P32969 192 aaKnown RBP27.78■■■□□ 2.04
SHOX2-204ENST00000483851 MLH1P40692 756 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 PEX5P50542 639 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 C2orf54Q08AI8 447 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 APPL2Q8NEU8 664 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.78■■■□□ 2.04
SHOX2-204ENST00000483851 SH3TC2Q8TF17 1288 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 GAD1Q99259 594 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 ARL5CA6NH57 179 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 MGEA5O60502 916 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 PAX3P23760 479 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 PTPROQ16827 1216 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 CRYBG2Q8N1P7 616 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 ADAM2Q99965 735 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 EHD2Q9NZN4 543 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 IP6K2Q9UHH9 426 aa27.78■■■□□ 2.04
SHOX2-204ENST00000483851 CCDC188H7C350 402 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 HUS1O60921 280 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 SETSIPP0DME0 302 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms