RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 ABHD18Q0P651 414 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 ABCB5Q2M3G0 1257 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 LEXMQ3ZCV2 418 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 CERKLQ49MI3 558 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 FIGNQ5HY92 759 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 EP400NLQ6ZTU2 488 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 USP30Q70CQ3 517 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 NOL8Q76FK4 1167 aaKnown RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 MAMDC2Q7Z304 686 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 NOSTRINQ8IVI9 506 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 SCUBE1Q8IWY4 988 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 ABRAQ8N0Z2 381 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 BCL6BQ8N143 479 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 PCSK9Q8NBP7 692 aaKnown RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 SHCBP1Q8NEM2 672 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 PRSS33Q8NF86 280 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 OR14K1Q8NGZ2 314 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 C12orf42Q96LP6 360 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 PLEKHG4BQ96PX9 1271 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 TRIM8Q9BZR9 551 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 USP44Q9H0E7 712 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 TRPV6Q9H1D0 765 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 UBE2ZQ9H832 354 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 CABP5Q9NP86 173 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 TLR9Q9NR96 1032 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 PLA2G3Q9NZ20 509 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 C11orf21Q9P2W6 132 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 NRBP1Q9UHY1 535 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 ZHX1Q9UKY1 873 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-217ENST00000483442 CHD7Q9P2D1 2997 aa4.29□□□□□ -1.72
LRCH3-217ENST00000483442 SYNRGQ9UMZ2 1314 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 A0A1B0GUL6 1792 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 H3BQ06 376 aaPredicted RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 AQP7O14520 342 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 PDPK1O15530 556 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 CLASP2O75122 1294 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 DUSP11O75319 330 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 KRT37O76014 449 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 CRTAMO95727 393 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 CD4P01730 458 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 ATP2B1P20020 1258 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 CDK11BP21127 795 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 ACRV1P26436 265 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 STAT3P40763 770 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 STAT5BP51692 787 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 BEX3Q00994 111 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 ITGA7Q13683 1181 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 KCTD2Q14681 263 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 GORABQ5T7V8 394 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 TMEM200BQ69YZ2 307 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 NAA16Q6N069 864 aaPredicted RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 ATF7IPQ6VMQ6 1270 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 CXXC5Q7LFL8 322 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 CISD2Q8N5K1 135 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 SPATA5Q8NB90 893 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 LARP4BQ92615 738 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 ZNF669Q96BR6 464 aaPredicted RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 TMEM176AQ96HP8 235 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 BTBD2Q9BX70 525 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 UPF3BQ9BZI7 483 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 FTOQ9C0B1 505 aaKnown RBP eCLIP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 WNT8AQ9H1J5 351 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 MMRN2Q9H8L6 949 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 SPC25Q9HBM1 224 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 HMG20BQ9P0W2 317 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 CEP72Q9P209 647 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 PUF60Q9UHX1 559 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 MTUS1Q9ULD2 1270 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 PA2G4Q9UQ80 394 aaKnown RBP4.28□□□□□ -1.72
LRCH3-217ENST00000483442 CACNA1AO00555 2505 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 WDFY4Q6ZS81 3184 aa4.28□□□□□ -1.72
LRCH3-217ENST00000483442 LOC285556D6RIA3 1793 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 MYH2Q9UKX2 1941 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 A0A1B0GUL7 405 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 A0A1W2PRG0 241 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 MPHOSPH10O00566 681 aaKnown RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 SCDO00767 359 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 ADCY6O43306 1168 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 FLOT1O75955 427 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 CIAO1O76071 339 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 SLC25A27O95847 323 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 CYP2C9P11712 490 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 ACTN1P12814 892 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 GUCY1A2P33402 732 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 GJA4P35212 333 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 IL15P40933 162 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 PSMC6P62333 389 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 SUMO1P63165 101 aaKnown RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 DYNLL1P63167 89 aaKnown RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 DPTQ07507 201 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 SSRP1Q08945 709 aaKnown RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 TFCP2Q12800 502 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 TCF15Q12870 199 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 DDX10Q13206 875 aaKnown RBP4.27□□□□□ -1.73
LRCH3-217ENST00000483442 ACVR2BQ13705 512 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 TMEM132BQ14DG7 1078 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 SEPT2Q15019 361 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 CRY1Q16526 586 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 CCDC144BQ3MJ40 725 aa4.27□□□□□ -1.73
LRCH3-217ENST00000483442 KIAA1755Q5JYT7 1200 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms