RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 MAFFQ9ULX9 164 aa14.36□□□□□ -0.11
SSR1-208ENST00000483409 SLC27A5Q9Y2P5 690 aa14.36□□□□□ -0.11
SSR1-208ENST00000483409 YIPF1Q9Y548 306 aa14.36□□□□□ -0.11
SSR1-208ENST00000483409 MYH10P35580 1976 aa14.36□□□□□ -0.11
SSR1-208ENST00000483409 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 GABRDO14764 452 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 SOAT2O75908 522 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
SSR1-208ENST00000483409 HLA-DRAP01903 254 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 POU2F2P09086 479 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 LHX1P48742 406 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 ENPEPQ07075 957 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 CCDC142Q17RM4 750 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 ZNF667Q5HYK9 610 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 INTS6LQ5JSJ4 861 aaKnown RBP14.35□□□□□ -0.11
SSR1-208ENST00000483409 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 DPH6Q7L8W6 267 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 LIMS2Q7Z4I7 341 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 RNF135Q8IUD6 432 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 DCP1BQ8IZD4 617 aaKnown RBP14.35□□□□□ -0.11
SSR1-208ENST00000483409 SPATA18Q8TC71 538 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 PI4K2AQ9BTU6 479 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 SMYD3Q9H7B4 428 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 TMLHEQ9NVH6 421 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 DNMT3BQ9UBC3 853 aaKnown RBP14.35□□□□□ -0.11
SSR1-208ENST00000483409 BDP1A6H8Y1 2624 aa14.35□□□□□ -0.11
SSR1-208ENST00000483409 N4BP1O75113 896 aaKnown RBP14.34□□□□□ -0.11
SSR1-208ENST00000483409 ATP2C2O75185 946 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 PDGFRBP09619 1106 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
SSR1-208ENST00000483409 FSHRP23945 695 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 LMO2P25791 158 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 PCSK1P29120 753 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 GBP2P32456 591 aaPredicted RBP14.34□□□□□ -0.11
SSR1-208ENST00000483409 RAP1GAPP47736 663 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 PSMC1P62191 440 aaKnown RBP14.34□□□□□ -0.11
SSR1-208ENST00000483409 MGAT5BQ3V5L5 792 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 PABPC1LQ4VXU2 614 aaKnown RBP14.34□□□□□ -0.11
SSR1-208ENST00000483409 SPOPLQ6IQ16 392 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 OTOP3Q7RTS5 596 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 ELMOD1Q8N336 334 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 TAS1R2Q8TE23 839 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 ACSF2Q96CM8 615 aaPredicted RBP14.34□□□□□ -0.11
SSR1-208ENST00000483409 CEP63Q96MT8 703 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 MYADMQ96S97 322 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 SEPT5Q99719 369 aaPredicted RBP14.34□□□□□ -0.11
SSR1-208ENST00000483409 SYT15Q9BQS2 421 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 ACBD6Q9BR61 282 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 CORO1BQ9BR76 489 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 SNX25Q9H3E2 840 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 VRTNQ9H8Y1 702 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 TMEM8AQ9HCN3 771 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 CEP72Q9P209 647 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 ARMCX3Q9UH62 379 aaPredicted RBP14.34□□□□□ -0.11
SSR1-208ENST00000483409 MUTYHQ9UIF7 546 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 USTQ9Y2C2 406 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 NME7Q9Y5B8 376 aa14.34□□□□□ -0.11
SSR1-208ENST00000483409 GREB1Q4ZG55 1949 aa14.33□□□□□ -0.11
SSR1-208ENST00000483409 DENND4CQ5VZ89 1909 aa14.33□□□□□ -0.11
SSR1-208ENST00000483409 MYBPHLA2RUH7 354 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 TACC1O75410 805 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 RHOP08100 348 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 PTPN2P17706 415 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 GTF2H1P32780 548 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 GNL1P36915 607 aaPredicted RBP14.33□□□□□ -0.12
SSR1-208ENST00000483409 ALDH1A3P47895 512 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 MXI1P50539 228 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 CDH8P55286 799 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 SMARCB1Q12824 385 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 SGSM1Q2NKQ1 1148 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 CCDC40Q4G0X9 1142 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 KRT39Q6A163 491 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 FILIP1Q7Z7B0 1213 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 OR6B3Q8NGW1 331 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 ITFG1Q8TB96 612 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 SPPL2BQ8TCT7 592 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 C2orf15Q8WU43 125 aaKnown RBP14.33□□□□□ -0.12
SSR1-208ENST00000483409 IMPG2Q9BZV3 1241 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 GTF3C4Q9UKN8 822 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 CDH9Q9ULB4 789 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 PCDHB5Q9Y5E4 795 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 OBSL1O75147 1896 aa14.33□□□□□ -0.12
SSR1-208ENST00000483409 STX10O60499 249 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 LRRN2O75325 713 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 ASS1P00966 412 aaKnown RBP14.32□□□□□ -0.12
SSR1-208ENST00000483409 ASGR2P07307 311 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 P4HA1P13674 534 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 EPHB3P54753 998 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 MCCD1P59942 119 aaPredicted RBP14.32□□□□□ -0.12
SSR1-208ENST00000483409 NOP14P78316 857 aaKnown RBP14.32□□□□□ -0.12
SSR1-208ENST00000483409 PLD1Q13393 1074 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 NFE2Q16621 373 aaPredicted RBP14.32□□□□□ -0.12
SSR1-208ENST00000483409 SLC5A9Q2M3M2 681 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 CBWD6Q4V339 395 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 CBWD3Q5JTY5 395 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 CBWD5Q5RIA9 395 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 IQCEQ6IPM2 695 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 FOXR2Q6PJQ5 311 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 FRMD5Q7Z6J6 570 aa14.32□□□□□ -0.12
SSR1-208ENST00000483409 ZDHHC14Q8IZN3 488 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms