RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 NAALADL1Q9UQQ1 740 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 ABCA3Q99758 1704 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 BCORQ6W2J9 1755 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 A8MXQ7 604 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 TRAPPC3O43617 180 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 APRTP07741 180 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 LCP1P13796 627 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 SDC4P31431 198 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 NFIL3Q16649 462 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 METTL7BQ6UX53 244 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 ZNF516Q92618 1163 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 HPDLQ96IR7 371 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 CLMNQ96JQ2 1002 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 ACAP3Q96P50 834 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 GPR88Q9GZN0 384 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 SNX25Q9H3E2 840 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 CD248Q9HCU0 757 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 RAB6BQ9NRW1 208 aa9.63□□□□□ -0.87
CALD1-220ENST00000482470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.63□□□□□ -0.87
CALD1-220ENST00000482470 ZNF214Q9UL59 606 aaPredicted RBP9.63□□□□□ -0.87
CALD1-220ENST00000482470 TNRC6CQ9HCJ0 1690 aaKnown RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 DOCK2Q92608 1830 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 SPATA31C2B4DYI2 1134 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 H0Y3Z8 333 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 I3L4J1 428 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 BANF1O75531 89 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 CPP00450 1065 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 ZNF286BP0CG31 522 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 CYP2C8P10632 490 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 RCN2Q14257 317 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 PIGHQ14442 188 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 STAT4Q14765 748 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 KIZQ2M2Z5 673 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 LGSNQ5TDP6 509 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 TRIM68Q6AZZ1 485 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 PPP1R2P3Q6NXS1 205 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 SLC39A4Q6P5W5 647 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 SPATA21Q7Z572 469 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 EGFL6Q8IUX8 553 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 C12orf56Q8IXR9 622 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 LMO3Q8TAP4 145 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 FAM129AQ9BZQ8 928 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 FHDC1Q9C0D6 1143 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 ETNK1Q9HBU6 452 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 KLK14Q9P0G3 267 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 CCT8L1PA6NM43 557 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 KCNN4O15554 427 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 RPS6KA5O75582 802 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 CREB1P16220 341 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 CTCFP49711 727 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 CLNS1AP54105 237 aaKnown RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 EEF1DP3Q658K8 133 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 TRPM8Q7Z2W7 1104 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 APBB1IPQ7Z5R6 666 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 KLRG1Q96E93 195 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 CAMKK2Q96RR4 588 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 ECT2Q9H8V3 914 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 APOBEC3GQ9HC16 384 aaKnown RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 SLC40A1Q9NP59 571 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.62□□□□□ -0.87
CALD1-220ENST00000482470 PCYOX1Q9UHG3 505 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 TMEM59LQ9UK28 342 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 NFKBIEO00221 500 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 STAG3L1P0CL83 205 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 KITP10721 976 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 INSRRP14616 1297 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 PECAM1P16284 738 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 RFC1P35251 1148 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 AUHQ13825 339 aaKnown RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 TMEM132DQ14C87 1099 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 ZRSR2Q15696 482 aaKnown RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 SPOCD1Q6ZMY3 1216 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 EXOC8Q8IYI6 725 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 ASCC2Q9H1I8 757 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 NINJ2Q9NZG7 142 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 WHRNQ9P202 907 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 USP15Q9Y4E8 981 aaPredicted RBP9.62□□□□□ -0.87
CALD1-220ENST00000482470 MYH11P35749 1972 aa9.62□□□□□ -0.87
CALD1-220ENST00000482470 CCDC195A0A1B0GUA6 201 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 PSTPIP1O43586 416 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 AP3M2P53677 418 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 SNX16P57768 344 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 NOMO3P69849 1222 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 ROR1Q01973 937 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 CENPCQ03188 943 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 CCNG2Q16589 344 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 MPZL3Q6UWV2 235 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 ACOT1Q86TX2 421 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 AFG1LQ8WV93 481 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 XPO7Q9UIA9 1087 aaKnown RBP9.61□□□□□ -0.87
CALD1-220ENST00000482470 CREB3O43889 395 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 SSTR1P30872 391 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 PDE1BQ01064 536 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 OVGP1Q12889 678 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 TFDP3Q5H9I0 405 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 C1orf220Q5T0J3 134 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 DENND1BQ6P3S1 775 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 CCDC62Q6P9F0 684 aa9.61□□□□□ -0.87
CALD1-220ENST00000482470 TTC13Q8NBP0 860 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms